PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA62084.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | G2-like | ||||||||
Protein Properties | Length: 294aa MW: 32288.4 Da PI: 6.5116 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 108.9 | 2.6e-34 | 30 | 84 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLH+rFv+av+qLGG++kAtPkti+++m++kgLtl+h+kSHLQkYR+ PKA62084.1 30 KPRLRWTAELHDRFVDAVAQLGGPDKATPKTIMRIMNIKGLTLYHLKSHLQKYRM 84 79****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 71.2 | 1.6e-22 | 32 | 83 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++vdav+qlGg+ t+ktI+r m+ kg+tl+++ks++qky+ PKA62084.1 32 RLRWTAELHDRFVDAVAQLGGPdkaTPKTIMRIMNiKGLTLYHLKSHLQKYR 83 89*************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MYLKGGQTGA SLEGRSLAVD ASLVLTADPK PRLRWTAELH DRFVDAVAQL GGPDKATPKT 60 IMRIMNIKGL TLYHLKSHLQ KYRMGKQSAK DIEKNSNDAS GVVESQGSTT SSTSKHADQE 120 FNDGCNEAMR VQMELQRRLH EQLEVQRSLQ LRIDAQGKYL QSILERACSA VMGPNLTSSE 180 TDDTTRNQPP EFPERENQGC LDFSIGPFKL PLLSEATPGD CPQVKSGSRE AFPQLTECSV 240 ESCLTTISSP GGGGSMFGPK DHILKKRSRS SVFLNGEFNA ANGIYEDETW ICSM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13640.1 | 3e-77 | G2-like family protein |