PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA62027.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GATA | ||||||||
Protein Properties | Length: 237aa MW: 24546.6 Da PI: 8.6414 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.5 | 2.4e-20 | 113 | 147 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++ PKA62027.1 113 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 147 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MLRWCGNGSA AAAAGGVPAS PCSFSMLFPV PGVPAEETIA EAAASSSVDC TLSLGTPYTR 60 HQSSSSPAMR RSPSVSSSLC LDILPQSSSK QMPPASSASS AGAGDPFLLA RRCANCDTTS 120 TPLWRNGPRG PKSLCNACGI RYKKEERRAA ASSTTTTPPA AAAAAALVHG DGFSYGCGRG 180 GQQHPWSYYP PPPPPPAKNP VISIYGGEQG DLPWRMNVVP AQFPAVGERS SSLFQYQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36620.1 | 6e-25 | GATA family protein |