PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62024.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ZF-HD
Protein Properties Length: 287aa    MW: 31744.4 Da    PI: 9.14
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer87.91e-2764113458
  ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                  + Y+eCl+NhAas+Ggh+vDGC+Efmps     + ++ kCaACgCHR+FHR++++
   PKA62024.1  64 FAYRECLRNHAASVGGHVVDGCCEFMPS-----NGDSYKCAACGCHRSFHRKDSD 113
                  78*************************9.....4579***************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MEFREDDGFA RASAFSKPSS SSRNGLALSP RPLPPPQQLP TADPDPFPMS VTSSPTAAAG  60
DFSFAYRECL RNHAASVGGH VVDGCCEFMP SNGDSYKCAA CGCHRSFHRK DSDAGGAPPP  120
PRGCRRRVPL LLQPPTAVAA AFSHYAHYQR PFGANSSLSG GTSTESSSEE RVDAGGLKAV  180
NPSPTTSSLS RKRFRTKFTP EQKAKMTGFA ERVGWRLQRQ DDAAIGEFCN EVGVRRQVFK  240
VWMHNNKHAM RKQQQQHQQQ QQQQQVLLLQ QQPHEQLELH ERPENYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-49ZF-HD family protein