PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PKA61920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 342aa MW: 37488 Da PI: 6.323 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 95.1 | 5.5e-30 | 176 | 229 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl PKA61920.1 176 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 229 59*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.4e-15 | 178 | 228 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vd+v+ lG + +ktI++ m+ +g+t++++ s++qky+ PKA61920.1 178 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 228 789*******************9***************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 342 aa Download sequence |
MAEEADLRGL ERRASRADEG EEGRVLEWEV GLPSGDDLTP LSQPLVPPDL ASAFSIPPAE 60 LKTVLDVHRA TQHTISNLKR PQNPSSSPQV SPLKPFSFSA APQRDDDGDD PMVLEADDPK 120 EYQSVSLIER GISETSARIV RRADVGASSA AAATEEADSS ALRAENSADD QRTTKRPRLV 180 WTPQLHKRFV DVVAHLGIKN AVPKTIMQLM NVEGLTRENV ASHLQKYRLY LKRMQGISSE 240 GPSSSDYLFA STPVPHSLHD QQQPPPPTLP MPMPYAVPTM IPMPVYSMPH HHAHGVVPLT 300 NHQGGPPYSG FDAHRSYVQN NWSSGAKFGS IVPYPRVSPD DK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G46640.2 | 2e-70 | G2-like family protein |