PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA61831.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | WOX | ||||||||
Protein Properties | Length: 204aa MW: 22485.1 Da PI: 9.7078 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 50.3 | 3.9e-16 | 30 | 89 | 2 | 56 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 r+R+++++eq+ +Le+ F++ + +p+++e+ ++ + l ++ ++++++WFqNrR + + PKA61831.1 30 RSRWSPKPEQTVILESIFNSgTVNPQKNEIVKIRQLLenfgSIRDSNIFYWFQNRRSRSR 89 89*****************99*************************************98 PP | |||||||
2 | Wus_type_Homeobox | 96.2 | 2.8e-31 | 29 | 92 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RW+P+peQ iLe++++sG+++P+k+ei +i++ Le++G i+d N+fyWFQNr++R+r +q PKA61831.1 29 TRSRWSPKPEQTVILESIFNSGTVNPQKNEIVKIRQLLENFGSIRDSNIFYWFQNRRSRSRSRQ 92 689**********************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MDRRTQEPKY PANGSPAAQP AGSSATGSTR SRWSPKPEQT VILESIFNSG TVNPQKNEIV 60 KIRQLLENFG SIRDSNIFYW FQNRRSRSRS RQRQLQEARS AAAAGGGGAL TVSSPESSLA 120 SSCLSTLSSS SDTVFINGIR TEVSAEPFDM RSTFGSAVFL IHSSGEVVQV DEYGVLLEGL 180 QVNERYYLVR YIKLSFSFSL SHLF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 85 | 93 | RSRSRSRQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17810.1 | 2e-23 | WOX family protein |