PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA61758.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 482aa MW: 52787.4 Da PI: 5.6618 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 430.2 | 1.6e-131 | 49 | 477 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 l++lLl+cA+ v++g+l +a+a+L+++s lasp+gd+mqR+a++fteALa+rl+r +++ly+al+p + + +++a++lf +++P+l++++l+ N PKA61758.1 49 LIHLLLNCATQVAAGNLDQANAFLEHISFLASPAGDAMQRIASFFTEALARRLLRFWPGLYRALNPDLPD---LAGAAHARRLFLDLCPFLRLCFLVSN 144 689*****************************************************************98...9************************* PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198 aIlea+ege+ vH++D++ s ++QW++Llq+La Rp+gpp+lRiT+v++ +++ l++t++ L+k Ae+l++pf+fn+ v++ le+l++e+Lrvk+ PKA61758.1 145 LAILEAMEGEKVVHVVDLGGSDPAQWVSLLQSLAGRPDGPPHLRITAVSD----RRDLLSHTASALTKEAEKLDIPFQFNA-VVSPLESLDFESLRVKT 238 **************************************************....9**************************.7**************** PP GRAS 199 gEalaVnlvlqlhrll.............................................................desvsles..erdevLklvksl 234 gEalaV++vlqlh+ll +++++++ + +++L v++l PKA61758.1 239 GEALAVSSVLQLHSLLaadddfaggkpaksgtsgsfaagsisqqlqrmiqlnsgghgpfgellekevngispssessSSPLAIPPlaKMENFLASVWGL 337 *************************************************************************997744444444667899******** PP GRAS 235 sPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplseka 333 sPk++vv+eqe++hn+ ++ +rf++al++y+alfd+le+++pr+s er+ vE+ ++g+ei+n++aceg +r+erhe+le+W +r+e+aGF+ vp+s+ PKA61758.1 338 SPKIMVVTEQESNHNGLTLNDRFMDALNFYAALFDCLESTVPRQSPERSAVEKLMFGEEIKNIIACEGLDRKERHEKLERWIQRMEMAGFGRVPMSYCG 436 *************************************************************************************************** PP GRAS 334 akqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 qa+++l ++ dgy+v+ee+gsl+++W++r+L+svSaWr PKA61758.1 437 LLQARRMLLGFGCDGYKVKEENGSLLFCWQERALYSVSAWR 477 ****************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 482 aa Download sequence |
MAGIADEVSS TVTSSSPLLS FMSISPSALS SPNAPWLREL KSDERGLFLI HLLLNCATQV 60 AAGNLDQANA FLEHISFLAS PAGDAMQRIA SFFTEALARR LLRFWPGLYR ALNPDLPDLA 120 GAAHARRLFL DLCPFLRLCF LVSNLAILEA MEGEKVVHVV DLGGSDPAQW VSLLQSLAGR 180 PDGPPHLRIT AVSDRRDLLS HTASALTKEA EKLDIPFQFN AVVSPLESLD FESLRVKTGE 240 ALAVSSVLQL HSLLAADDDF AGGKPAKSGT SGSFAAGSIS QQLQRMIQLN SGGHGPFGEL 300 LEKEVNGISP SSESSSSPLA IPPLAKMENF LASVWGLSPK IMVVTEQESN HNGLTLNDRF 360 MDALNFYAAL FDCLESTVPR QSPERSAVEK LMFGEEIKNI IACEGLDRKE RHEKLERWIQ 420 RMEMAGFGRV PMSYCGLLQA RRMLLGFGCD GYKVKEENGS LLFCWQERAL YSVSAWRSRR 480 YD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 1e-176 | GRAS family protein |