PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA61641.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 581aa    MW: 65097.4 Da    PI: 6.1828
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA61641.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS397.31.6e-1211975652373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklfsevsPilkfshltaN 99 
                  +lL+ecA+ +ss+++ +a+ +Larl elasp+g+p++R+aayfteALa r ++ +++++ + pp + +e    ++e++a++l+++ sPi+kf h+t N
  PKA61641.1 197 LNLLVECAQSISSSNHPAASFFLARLGELASPAGSPIHRVAAYFTEALAIRASNLWPHVFCIAPPAQLTELIaGDDEAMAFRLLNNFSPIPKFIHFTLN 295
                 689**********************************************************99998888655799************************ PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 + +l+a+eg++rvHiiD+di+qGlQWp ++++LasRpe+p ++RiTg+g+    sk+el++tg rLa +A +l++pfef+  v++rled++l++L+vk+
  PKA61641.1 296 ERLLRAFEGKDRVHIIDLDIKQGLQWPGFFHSLASRPEPPTHVRITGIGQ----SKQELQATGARLAGIAGNLNLPFEFHW-VVDRLEDVRLWMLHVKE 389
                 **************************************************....***************************.8**************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.eerikvErellgreivn 296
                 +E +aVn+vlqlhrll ++ +l      +L l++s++P ++v++e ea+hn++++ +rf+ al+yysalfd++++++  ++   r+k+E++ ++r+ +n
  PKA61641.1 390 REFVAVNCVLQLHRLLFDEKNLMG----LLGLIRSTNPAIIVLAEVEAEHNEQRWEKRFATALQYYSALFDMIDSSFQGDDsPSRSKIEEM-FARKMRN 483
                 ****************88888888....*********************************************888766555*********.******* PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee....sgslvlgWkdrpLvsvSaW 373
                 ++aceg er erhe++++Wr++le+ GF+++ +++++  q + ll++++ +  y v +e     + + l W+d+pL++vSaW
  PKA61641.1 484 IIACEGVERLERHESFRSWRRMLEDGGFRSAGFNDRERIQSNILLKMYQsGTNYIVAKEeddrYDGISLKWMDQPLYTVSAW 565
                 *************************************************8888999855344356777************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 581 aa     Download sequence    
MLAGYQIQEY TMSTQRLDLP CSFSRKEAAR VSLTFEKKSE SRSSCSLRPN PVLPSSSAIV  60
AQTASWESRR EREGELWKKG RSLKRFIHDS GTFEDSCLDR LKRKKTCGGG GDDNGDFSLP  120
LPVQHPSAED EEEEDKVSFL PASTEGALIQ FQTGEANSGS SSSSGSHGSS PKLKEESSEK  180
KVAIDSTRAE HEAHELLNLL VECAQSISSS NHPAASFFLA RLGELASPAG SPIHRVAAYF  240
TEALAIRASN LWPHVFCIAP PAQLTELIAG DDEAMAFRLL NNFSPIPKFI HFTLNERLLR  300
AFEGKDRVHI IDLDIKQGLQ WPGFFHSLAS RPEPPTHVRI TGIGQSKQEL QATGARLAGI  360
AGNLNLPFEF HWVVDRLEDV RLWMLHVKER EFVAVNCVLQ LHRLLFDEKN LMGLLGLIRS  420
TNPAIIVLAE VEAEHNEQRW EKRFATALQY YSALFDMIDS SFQGDDSPSR SKIEEMFARK  480
MRNIIACEGV ERLERHESFR SWRRMLEDGG FRSAGFNDRE RIQSNILLKM YQSGTNYIVA  540
KEEDDRYDGI SLKWMDQPLY TVSAWAAAMD IAGSSSVSQP G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.11e-141GRAS family protein