PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA61465.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB | ||||||||
Protein Properties | Length: 254aa MW: 29058.4 Da PI: 5.4099 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.6 | 1.8e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l + + ++G g+W+++++ g+ R++k+c++rw +yl PKA61465.1 14 KGLWSPEEDEKLFNHIIRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++++eE++l++++++ lG++ W+ Ia+ ++ gRt++++k++w++ PKA61465.1 67 RGSFSQEEEDLIINLHEVLGNR-WSQIASQLP-GRTDNEIKNFWNSC 111 899*******************.*********.***********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MGRHSCCMKQ KLRKGLWSPE EDEKLFNHII RFGVGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SQEEEDLIIN LHEVLGNRWS QIASQLPGRT DNEIKNFWNS CLKKKLRQRG 120 IDPATHKPLN ESEAKEKMDP EKPMFDPFPV FEFQSEPDQS GANLNFYEQF QTSLIPAHGF 180 CEYGNMLIDG SENYCYGESS GTSCNWSCNM GNEALNWNSE GDQWQQGGSC QANSSEDNND 240 SIQMRNSYFG GDLL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 118 | LKKKLRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26660.1 | 1e-82 | MYB family protein |