PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA61115.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Nin-like

Protein Properties

Length: 856aa MW: 95716.7 Da PI: 6.8005

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA61115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	86.4	2.5e-27	589	639	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yF++++kdAAk++gv++T+LKriCRqyGI+RWP+Rkik++ PKA61115.1 589 EKTVSLQVLRQYFAGNLKDAAKSIGVSPTTLKRICRQYGIARWPSRKIKKV 639 689**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 856 aa Download sequence
MEDNEPAAPP PVSLSELDLM DEFILSRGWV GSPDCSILLG ASSSPTSPFG SSGFFPAIDI 60 SNSGSNPVIR NDHTQEEGAE RSVLHLNPSQ DDTQANVSDG KEAHDLNTER WLIQPMIPVA 120 SLKERFAHAL NHIKETLTNE NVLLQIWVPV KIGERYFLST VGQPFSLDQN CPNLINYRTV 180 SMNYCFSAEE NSSEAAGFPG RVFLGRIPEW TPDVRYFTSY EFPRVDHAQR CNVHSTIAFP 240 IFQANNPSCL GVLEVVSMMQ KINYHCDLEN ICNALQAVDL RSCSVFSVPG EKANFNGHTA 300 TLLEIFEIIR AVCETHKLPL AQTWIPCIQH GKKGCRHSEE NYKNCISTVD EACYVKDSSI 360 QGFHEACSEY HLFKGQGVVG KAFTTNQPCF SADITAFSKI EYPLSHHAKL FNLQAAVAIR 420 LRSIHSSNVD FVLELFLPID CREHEEQIMI LNSLSITVQQ VSRSLRFITA KELHEEIDYS 480 IPSDVFFDKP DSERLQASLI EDEPSWLTSN IKARHKEAGI SLFRQESQEL RLSRQSHQSK 540 IKLPAEEICC ELKQFHNVLG RDNDKKNTSH GFTTLNSDKA TGEKHKKPEK TVSLQVLRQY 600 FAGNLKDAAK SIGVSPTTLK RICRQYGIAR WPSRKIKKVG HSFRKLKVLI DSVQGAEGTF 660 HLSSLYGNFS KLPSSQNKSS DRGKTSTQSQ TDLAECVNAH RPSGSNSASS CSHGSSSSLG 720 CSTSSKHDAH SIPNSIEQEV AVCKGQPDRF KRVQSQPELQ ISAQGTPELA GRSQSWEHLL 780 KVKAVYGEER VRFRLHANWG FEDLKQEIVR RLHITEANST QLKYLDDDSE WILLACDDDL 840 RECVAVHRSS ANPTRG

Sequence ? help Back to Top

Protein Sequence Length: 856 aa Download sequence

MEDNEPAAPP PVSLSELDLM DEFILSRGWV GSPDCSILLG ASSSPTSPFG SSGFFPAIDI  60
SNSGSNPVIR NDHTQEEGAE RSVLHLNPSQ DDTQANVSDG KEAHDLNTER WLIQPMIPVA  120
SLKERFAHAL NHIKETLTNE NVLLQIWVPV KIGERYFLST VGQPFSLDQN CPNLINYRTV  180
SMNYCFSAEE NSSEAAGFPG RVFLGRIPEW TPDVRYFTSY EFPRVDHAQR CNVHSTIAFP  240
IFQANNPSCL GVLEVVSMMQ KINYHCDLEN ICNALQAVDL RSCSVFSVPG EKANFNGHTA  300
TLLEIFEIIR AVCETHKLPL AQTWIPCIQH GKKGCRHSEE NYKNCISTVD EACYVKDSSI  360
QGFHEACSEY HLFKGQGVVG KAFTTNQPCF SADITAFSKI EYPLSHHAKL FNLQAAVAIR  420
LRSIHSSNVD FVLELFLPID CREHEEQIMI LNSLSITVQQ VSRSLRFITA KELHEEIDYS  480
IPSDVFFDKP DSERLQASLI EDEPSWLTSN IKARHKEAGI SLFRQESQEL RLSRQSHQSK  540
IKLPAEEICC ELKQFHNVLG RDNDKKNTSH GFTTLNSDKA TGEKHKKPEK TVSLQVLRQY  600
FAGNLKDAAK SIGVSPTTLK RICRQYGIAR WPSRKIKKVG HSFRKLKVLI DSVQGAEGTF  660
HLSSLYGNFS KLPSSQNKSS DRGKTSTQSQ TDLAECVNAH RPSGSNSASS CSHGSSSSLG  720
CSTSSKHDAH SIPNSIEQEV AVCKGQPDRF KRVQSQPELQ ISAQGTPELA GRSQSWEHLL  780
KVKAVYGEER VRFRLHANWG FEDLKQEIVR RLHITEANST QLKYLDDDSE WILLACDDDL  840
RECVAVHRSS ANPTRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein