PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA61103.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 216aa MW: 23870.8 Da PI: 7.1971 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.5 | 1.7e-18 | 50 | 99 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg++ tae+Aa+a++ a+++++g PKA61103.1 50 TYRGVRMRT-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKG 99 69****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MVEPLSPTSS SACSSSCLPT SKSEEKETNA VCGSRAVKKQ IIRDGRKHPT YRGVRMRTWG 60 KWVSEIREPR KKSRIWLGTY PTAEMAARAH DVAALAIKGQ SAYLNFPDLA HQLPRPATAS 120 PKDIQFAAAK AAAAPKSDGR HSPADRAPSS PTADNDDDDA ALFDLPDLLL DLKWSSWLSS 180 SSSEYFAEIR LDHEPFLWEP FQLGENIHVF DLHSLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 9e-49 | ERF family protein |