PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA61080.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 834aa    MW: 89828.6 Da    PI: 6.4804
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA61080.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS301.32.4e-924237842374
        GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlar..svselykal.ppsetseknsseelaalklfsevsPilkfshl 96 
                 v++L+++Ae v++g+++ a+ +Larl+++  s +g+p+ R a++f+eAL+   ++  s s+l ++  ++  ts+ +++ +l+a+k+fsevsP+l+f ++
  PKA61080.1 423 VDQLFKAAELVEAGNFAGAHGILARLNHQlPSAHGKPLLRSAFFFKEALQLLANSacSPSSLHRTPlTTPLTSPLDVVVKLSAYKAFSEVSPVLQFINF 521
                 789************************9989*********************999422233333332444445555*********************** PP

        GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLa.sRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                 t  qa+le++ +++++HiiDfdi+ G+QW +++++La +R++  p l+iT+++ +++++  el+ t+++L++fA+el++pfefn+   ++++++++ e+
  PKA61080.1 522 TSTQALLEELGTATCIHIIDFDIGVGGQWSSFMEELAqQRSAAIPLLKITAFVCSSAFHPLELRLTRDNLSHFAAELNIPFEFNI---SSIDSFNPAEI 617
                 *************************************778899***********9999**************************9...89********* PP

        GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
                   + + a+aV+l +   + +    sl+s    +L +vk+l Pkvv+ v+q +d+++ sF ++fl++++ y++l ds++a  +++ + ++k+E ++l+++
  PKA61080.1 618 LASCNAAIAVSLPVGARHGP----SLPS----LLGIVKQLLPKVVISVDQACDRSDLSFSNHFLHSFQSYMTLIDSIDAA-GANLDVANKIETFVLQPR 707
                 9999**********999998....6666....*********************************************998.7888************** PP

        GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 i+n+v +++++      +++ Wr  + +aGF p+++s++a++qa++ll++v+++g++ e+++ s+vl+W++ +L svSaWr
  PKA61080.1 708 IENCVIARHRA----AVKMMPWRTLFASAGFVPLQFSNFAEMQAECLLKRVQVRGFHAEKRHSSIVLYWQRGELASVSAWR 784
                 *******9999....8899*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 834 aa     Download sequence    
MRGLPFDLQG KGALQVLESE ETGDLVAGEG GVIWSSKIVE VLEPRSVLDQ RRSPSPPTST  60
STLSSSQGRT TGSDIAGVAA VSENLIVKWP ISGATISCTS TAPAGEAGRR KDGWISELQS  120
IQGALEFGGL ADGSEKCGTG VDDWEVMLSE SAAPPGHEQT FLHWITGDVG DPSNAKHQNL  180
FLSSESSPAV LDSGSGGPGF SLIDSGFGFD SIAEIVGGPS VLASSFDTAL SSHGGLKNHH  240
SAQLIHPTPL PPPVAPGSKN RSFFSQTVCP VLAPPVTLSL PPATLFPNSG EQKRQIFVPD  300
VLIQHQQTHS PPNPSFFPPP SFSAVHDLQQ TQNFFQSHHS IPLDPSGRIQ STGGGHELFP  360
RLNHPHSQLP HSRNLNLPQL NRVTYLQERP TKTKSPAASN ESAAAAAAAA AIAVQQQQQQ  420
AIVDQLFKAA ELVEAGNFAG AHGILARLNH QLPSAHGKPL LRSAFFFKEA LQLLANSACS  480
PSSLHRTPLT TPLTSPLDVV VKLSAYKAFS EVSPVLQFIN FTSTQALLEE LGTATCIHII  540
DFDIGVGGQW SSFMEELAQQ RSAAIPLLKI TAFVCSSAFH PLELRLTRDN LSHFAAELNI  600
PFEFNISSID SFNPAEILAS CNAAIAVSLP VGARHGPSLP SLLGIVKQLL PKVVISVDQA  660
CDRSDLSFSN HFLHSFQSYM TLIDSIDAAG ANLDVANKIE TFVLQPRIEN CVIARHRAAV  720
KMMPWRTLFA SAGFVPLQFS NFAEMQAECL LKRVQVRGFH AEKRHSSIVL YWQRGELASV  780
SAWRAPLTDH VEEEDDSHWL RWVVVIACRD IRNRKRNIIF MGFGPESAIV NDAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.17e-96GRAS family protein