PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60848.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 273aa    MW: 29224.6 Da    PI: 6.9174
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60848.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.00028184206123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ Cg  Fs+   L  H+r+H
  PKA60848.1 184 HECSVCGSEFSSGQALGGHMRRH 206
                 78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MESQQEALGS NSCSSSSGDG PYPSFTRRKR TARQRAAPLP PAAAAAAASS SASSAEDSGI  60
TDQEEDMANC LILLAQGRNL PTDEFGGAAP GRFTSRRFAE AATSGGRAGF YLYECKTCFK  120
CFPTFQALGG HRTSHKKPKP AAPAEFKNGA VIHGIEGYPQ PISSKPPPPA NLTGKDCAGK  180
AKIHECSVCG SEFSSGQALG GHMRRHRPAS VPREHEKMKE EESRNVFPID LNLPAPSDVD  240
YDDDFAGDLR KPLVVFSLVD CHYEADDSIY KLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.16e-40C2H2 family protein