PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA60836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 437aa MW: 49251.5 Da PI: 5.3461 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 398.1 | 8.9e-122 | 50 | 419 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppse.tseknsseelaalklfsevsPilkfshlta 98 ++ L++cAe +ssgd++ ++ ++arl e asp+g +p++RlaayfteAL+ r a++++ +++ p++ +++ +++e + a++l+ +++Pi+kf h+t PKA60836.1 50 ISFLTSCAESISSGDHASINYFMARLGESASPSGqTPTHRLAAYFTEALSLRAASQWPLTFSLNLPRDlADPVEQEEDAVAFRLLDQATPIPKFIHFTL 148 678*******************************99************************99886655055566999999******************* PP GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197 Nq +++a+eg +rvHiiD+di GlQWp+L+q+LasR+++p ++RiTgvg sk el++tg rL+ +A++l++pf+f++ v+++led++l++L+vk PKA60836.1 149 NQRMMRAFEGMDRVHIIDLDIRFGLQWPSLFQSLASRQHPPSHVRITGVGG----SKLELQRTGARLSAIADSLNLPFQFHA-VVDQLEDVRLWMLHVK 242 ***************************************************....9**************************.7*************** PP GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296 +gE++aVn ++qlhr+l +++ + +++L ++ s +Pk++ ++e+e + n+ ++ +rf+e+l+yysa+fd+l+++lp++ +er+k+E+ +gr+i+n PKA60836.1 243 EGECVAVNAAFQLHRTLYDEAGGAL--KDLLGVIHSANPKIFLLAEEEGENNQFRWEKRFAESLKYYSAIFDALDSSLPENGSERMKIEKT-FGRKIRN 338 ****************977665555..89**************************************************************.******* PP GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve...eesgslvlgWkdrpLvsvSaW 373 ++a+egaer+erhe+++kWr+++e+ GF+ v ++e+++ q + +lr+++ y++e e+ g l+l W++++L++vSaW PKA60836.1 339 IIAAEGAERFERHESFGKWRRMMEDGGFRIVGIGEEEVIQGEVILRMYSdYASYSLEkkgEDGGGLCLKWREQELYTVSAW 419 *************************************************8888****6666799***************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 437 aa Download sequence |
MCLYSQAEYE QLYHINTRVH NSDNNGCVSF LLTSQGDKTQ TENQAGFELI SFLTSCAESI 60 SSGDHASINY FMARLGESAS PSGQTPTHRL AAYFTEALSL RAASQWPLTF SLNLPRDLAD 120 PVEQEEDAVA FRLLDQATPI PKFIHFTLNQ RMMRAFEGMD RVHIIDLDIR FGLQWPSLFQ 180 SLASRQHPPS HVRITGVGGS KLELQRTGAR LSAIADSLNL PFQFHAVVDQ LEDVRLWMLH 240 VKEGECVAVN AAFQLHRTLY DEAGGALKDL LGVIHSANPK IFLLAEEEGE NNQFRWEKRF 300 AESLKYYSAI FDALDSSLPE NGSERMKIEK TFGRKIRNII AAEGAERFER HESFGKWRRM 360 MEDGGFRIVG IGEEEVIQGE VILRMYSDYA SYSLEKKGED GGGLCLKWRE QELYTVSAWA 420 PNPVEAAGLR SAESQRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63100.1 | 1e-138 | GRAS family protein |