PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60836.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 437aa    MW: 49251.5 Da    PI: 5.3461
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60836.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS398.18.9e-122504192373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppse.tseknsseelaalklfsevsPilkfshlta 98 
                 ++ L++cAe +ssgd++ ++ ++arl e asp+g +p++RlaayfteAL+ r a++++ +++   p++ +++ +++e + a++l+ +++Pi+kf h+t 
  PKA60836.1  50 ISFLTSCAESISSGDHASINYFMARLGESASPSGqTPTHRLAAYFTEALSLRAASQWPLTFSLNLPRDlADPVEQEEDAVAFRLLDQATPIPKFIHFTL 148
                 678*******************************99************************99886655055566999999******************* PP

        GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 Nq +++a+eg +rvHiiD+di  GlQWp+L+q+LasR+++p ++RiTgvg     sk el++tg rL+ +A++l++pf+f++ v+++led++l++L+vk
  PKA60836.1 149 NQRMMRAFEGMDRVHIIDLDIRFGLQWPSLFQSLASRQHPPSHVRITGVGG----SKLELQRTGARLSAIADSLNLPFQFHA-VVDQLEDVRLWMLHVK 242
                 ***************************************************....9**************************.7*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 +gE++aVn ++qlhr+l +++  +   +++L ++ s +Pk++ ++e+e + n+ ++ +rf+e+l+yysa+fd+l+++lp++ +er+k+E+  +gr+i+n
  PKA60836.1 243 EGECVAVNAAFQLHRTLYDEAGGAL--KDLLGVIHSANPKIFLLAEEEGENNQFRWEKRFAESLKYYSAIFDALDSSLPENGSERMKIEKT-FGRKIRN 338
                 ****************977665555..89**************************************************************.******* PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve...eesgslvlgWkdrpLvsvSaW 373
                 ++a+egaer+erhe+++kWr+++e+ GF+ v ++e+++ q + +lr+++    y++e   e+ g l+l W++++L++vSaW
  PKA60836.1 339 IIAAEGAERFERHESFGKWRRMMEDGGFRIVGIGEEEVIQGEVILRMYSdYASYSLEkkgEDGGGLCLKWREQELYTVSAW 419
                 *************************************************8888****6666799***************** PP

Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    
MCLYSQAEYE QLYHINTRVH NSDNNGCVSF LLTSQGDKTQ TENQAGFELI SFLTSCAESI  60
SSGDHASINY FMARLGESAS PSGQTPTHRL AAYFTEALSL RAASQWPLTF SLNLPRDLAD  120
PVEQEEDAVA FRLLDQATPI PKFIHFTLNQ RMMRAFEGMD RVHIIDLDIR FGLQWPSLFQ  180
SLASRQHPPS HVRITGVGGS KLELQRTGAR LSAIADSLNL PFQFHAVVDQ LEDVRLWMLH  240
VKEGECVAVN AAFQLHRTLY DEAGGALKDL LGVIHSANPK IFLLAEEEGE NNQFRWEKRF  300
AESLKYYSAI FDALDSSLPE NGSERMKIEK TFGRKIRNII AAEGAERFER HESFGKWRRM  360
MEDGGFRIVG IGEEEVIQGE VILRMYSDYA SYSLEKKGED GGGLCLKWRE QELYTVSAWA  420
PNPVEAAGLR SAESQRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.11e-138GRAS family protein