PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA60734.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB | ||||||||
Protein Properties | Length: 246aa MW: 27860.5 Da PI: 6.1734 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.7 | 1.7e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv + G +W+++++ g+ R++k+c++rw +yl PKA60734.1 14 KGPWTAEEDKKLVSFILSNGHCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51.1 | 3.1e-16 | 70 | 111 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T E+++ ++++++lG++ W++Ia++++ gRt++++k++w+++ PKA60734.1 70 LTDAEEQIVINLHARLGNR-WSKIASKLP-GRTDNEIKNHWNTH 111 5899***************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MGRQPCCDKL RVKKGPWTAE EDKKLVSFIL SNGHCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL TDAEEQIVIN LHARLGNRWS KIASKLPGRT DNEIKNHWNT HIKKKLLRMG 120 IDPITHKPLT DDQSSPAATT SSNSAITIEE IFGSNHASPP QETGINPVSI ELNSGTCQDP 180 MVIENCILED HHNSTFSDSY WSFLDGIEAN WEGLSSHEWL LDYQDFGLED LELEILGFDH 240 EENKLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12350.1 | 1e-83 | MYB family protein |