PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60600.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 338aa    MW: 38731.3 Da    PI: 6.2278
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60600.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.73.2e-51101411129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 
                 lppGfrF P+d+elv++yL++kv+++k++ +e  + evd+++ ePw+Lp+ +k  e+ewyfFs rd+kyatg r+nratksgyWkatgkd+ +++   +
  PKA60600.1  10 LPPGFRFYPSDQELVCHYLQRKVTNHKTSDQEPtMVEVDLHTREPWELPEVAKLCENEWYFFSFRDRKYATGLRTNRATKSGYWKATGKDRVIHNPktH 108
                 79**********************9997776666***************88888999*************************************98777 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrle 129
                 g  +g++ktLvfy+grap+g kt+Wvmhe+rle
  PKA60600.1 109 GVIIGMRKTLVFYRGRAPNGMKTSWVMHEFRLE 141
                 788***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MGLRDIESTL PPGFRFYPSD QELVCHYLQR KVTNHKTSDQ EPTMVEVDLH TREPWELPEV  60
AKLCENEWYF FSFRDRKYAT GLRTNRATKS GYWKATGKDR VIHNPKTHGV IIGMRKTLVF  120
YRGRAPNGMK TSWVMHEFRL ENPHSPPKED WVLCRVFHKR KVENVRVGFE NIEAQDSATV  180
GYSDSNLEAS GSADHDQLEQ LGNIETEGCH GNMIMSEIPF ATHQEGSKSN SFLNLALLQH  240
NFLDFQQEII VDSTDHLIGD MGSSSCRHGG NIGDNLELSF LVDMGLGGGH DDHDHQIGDH  300
ERIIRREMGC IENMRCQDGK EKYWSPSSPY LLQSEYSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.14e-77NAC family protein