PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA60416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 579aa MW: 61157.4 Da PI: 6.7091 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 321.6 | 1.6e-98 | 206 | 579 | 5 | 374 |
GRAS 5 LlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklfsevsPilkfshltaNqaI 102 L + A a+s+g+l +a a La l+ a+p gdp qRlaa+++ AL +r+++ +al +s+ + s+e+ aa ++++e+sP++k++ ++aN aI PKA60416.1 206 LQDTAAAISEGNLDAAVANLAVLKLAANPLGDPEQRLAAMMVAALVSRINS------RALGSSAMIADVcSAEHQAAAHMLYEASPCFKLTLMAANLAI 298 7789***********************************************......455333333333389999999********************* PP GRAS 103 leavegeervHiiDfdisqGlQWpaLlqaLasRp......egppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvlvakrledlel 191 lea++ + +vHi+Dfd++qG Q ++L++a+a+R ++pp ++iT+v +p+ + + +g+rL k+A++lg+ + f+ v+ r+++l+ PKA60416.1 299 LEATKDSPKVHILDFDLGQGRQMASLIHAIAERHrklspsRPPPAVKITAVCDPSFPfnssAAGDSKLVGDRLGKLADRLGLALLFSS-VTLRTTELSR 396 ********************************997777767799*********8865787788899**********************.78999***** PP GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290 e+L ++ gE+laVn+++ l r+ desvs +++rde+L+ vk l+P vv ++eq+++ n+++F++rf+ea+ +y al++sl+a+++r+s +r+ vE+ l PKA60416.1 397 ETLGCELGESLAVNFAFVLSRVADESVSPANPRDELLRRVKALRPAVVALAEQDMNGNTAPFAARFSEACAHYGALLESLDATAGRDSVDRARVEAC-L 494 ***********************************************************************************************87.* PP GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 +r++ n va eg++r+er+e ++kWr+r+++aGF+pvp++ aa+ +k+ + ++ + g++++ee g+l gW++r L+++S Wr PKA60416.1 495 ARKAANSVASEGSDRVERCEVYGKWRARFGMAGFHPVPIGPAAAEPVKARFSSIGnNPGFTIKEEAGWLGCGWMGRVLIVASTWR 579 *******************************************************99***************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 579 aa Download sequence |
MASSFPGSDL PRAVGYGVGS AVQLPYQQRS DDAGTVAGAG GILKRSLTEL ERQQQMQNAI 60 FLRSVKQRNH LSSPISPLSL VDLSCLSPAA VSLRGLDFSV WPSPAEASAA QAESEKKLSM 120 TNQLLELERQ LLDDDEDELS VYGSVLTNSE WSKTMQALAS AVPAALPTPA TNQSSLSPSP 180 TTSSSSSSSS RASCSPSPSV SSRLMLQDTA AAISEGNLDA AVANLAVLKL AANPLGDPEQ 240 RLAAMMVAAL VSRINSRALG SSAMIADVCS AEHQAAAHML YEASPCFKLT LMAANLAILE 300 ATKDSPKVHI LDFDLGQGRQ MASLIHAIAE RHRKLSPSRP PPAVKITAVC DPSFPFNSSA 360 AGDSKLVGDR LGKLADRLGL ALLFSSVTLR TTELSRETLG CELGESLAVN FAFVLSRVAD 420 ESVSPANPRD ELLRRVKALR PAVVALAEQD MNGNTAPFAA RFSEACAHYG ALLESLDATA 480 GRDSVDRARV EACLARKAAN SVASEGSDRV ERCEVYGKWR ARFGMAGFHP VPIGPAAAEP 540 VKARFSSIGN NPGFTIKEEA GWLGCGWMGR VLIVASTWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52510.1 | 1e-99 | GRAS family protein |