PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60416.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 579aa    MW: 61157.4 Da    PI: 6.7091
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60416.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS321.61.6e-982065795374
        GRAS   5 LlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklfsevsPilkfshltaNqaI 102
                 L + A a+s+g+l +a a La l+  a+p gdp qRlaa+++ AL +r+++      +al +s+   +  s+e+ aa ++++e+sP++k++ ++aN aI
  PKA60416.1 206 LQDTAAAISEGNLDAAVANLAVLKLAANPLGDPEQRLAAMMVAALVSRINS------RALGSSAMIADVcSAEHQAAAHMLYEASPCFKLTLMAANLAI 298
                 7789***********************************************......455333333333389999999********************* PP

        GRAS 103 leavegeervHiiDfdisqGlQWpaLlqaLasRp......egppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                 lea++ + +vHi+Dfd++qG Q ++L++a+a+R       ++pp ++iT+v +p+       +   + +g+rL k+A++lg+ + f+  v+ r+++l+ 
  PKA60416.1 299 LEATKDSPKVHILDFDLGQGRQMASLIHAIAERHrklspsRPPPAVKITAVCDPSFPfnssAAGDSKLVGDRLGKLADRLGLALLFSS-VTLRTTELSR 396
                 ********************************997777767799*********8865787788899**********************.78999***** PP

        GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290
                 e+L ++ gE+laVn+++ l r+ desvs +++rde+L+ vk l+P vv ++eq+++ n+++F++rf+ea+ +y al++sl+a+++r+s +r+ vE+  l
  PKA60416.1 397 ETLGCELGESLAVNFAFVLSRVADESVSPANPRDELLRRVKALRPAVVALAEQDMNGNTAPFAARFSEACAHYGALLESLDATAGRDSVDRARVEAC-L 494
                 ***********************************************************************************************87.* PP

        GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +r++ n va eg++r+er+e ++kWr+r+++aGF+pvp++  aa+ +k+  + ++ + g++++ee g+l  gW++r L+++S Wr
  PKA60416.1 495 ARKAANSVASEGSDRVERCEVYGKWRARFGMAGFHPVPIGPAAAEPVKARFSSIGnNPGFTIKEEAGWLGCGWMGRVLIVASTWR 579
                 *******************************************************99***************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 579 aa     Download sequence    
MASSFPGSDL PRAVGYGVGS AVQLPYQQRS DDAGTVAGAG GILKRSLTEL ERQQQMQNAI  60
FLRSVKQRNH LSSPISPLSL VDLSCLSPAA VSLRGLDFSV WPSPAEASAA QAESEKKLSM  120
TNQLLELERQ LLDDDEDELS VYGSVLTNSE WSKTMQALAS AVPAALPTPA TNQSSLSPSP  180
TTSSSSSSSS RASCSPSPSV SSRLMLQDTA AAISEGNLDA AVANLAVLKL AANPLGDPEQ  240
RLAAMMVAAL VSRINSRALG SSAMIADVCS AEHQAAAHML YEASPCFKLT LMAANLAILE  300
ATKDSPKVHI LDFDLGQGRQ MASLIHAIAE RHRKLSPSRP PPAVKITAVC DPSFPFNSSA  360
AGDSKLVGDR LGKLADRLGL ALLFSSVTLR TTELSRETLG CELGESLAVN FAFVLSRVAD  420
ESVSPANPRD ELLRRVKALR PAVVALAEQD MNGNTAPFAA RFSEACAHYG ALLESLDATA  480
GRDSVDRARV EACLARKAAN SVASEGSDRV ERCEVYGKWR ARFGMAGFHP VPIGPAAAEP  540
VKARFSSIGN NPGFTIKEEA GWLGCGWMGR VLIVASTWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-99GRAS family protein