PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PKA60312.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 277aa MW: 31068.3 Da PI: 9.8207 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.8 | 9.7e-08 | 231 | 252 | 4 | 25 |
XCHHHCHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKk 25 ++r++r++kNRe+A rsR+RK+ PKA60312.1 231 DRRQKRMIKNRESAARSRARKL 252 68*******************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 277 aa Download sequence |
MAAQSGDEGG AGGAGGLQRS HQMSLAKRSS LYSLTLNEVE SHLGQPLSSM NLDELLRSVL 60 PLETNQALEN WGQCAYVTSL QCRPLRKKTV DQVWGDIKKG QRKKGRERQR LGRRLTLGEM 120 TLEDFLEMAG VVAGGFDADK HEDNVIKNVA HNRGSNPTGI VQDYVQDQQW LQQYQQMPRV 180 DQQQRIPQNK LGAFKGQSNM SPPATTGALS ASHTTGWKRS ASEVVEDKLV DRRQKRMIKN 240 RESAARSRAR KLVLCFSICF LFVFYMHSAF CLPDEMQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56850.1 | 4e-31 | bZIP family protein |