PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60162.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 591aa    MW: 66091.5 Da    PI: 8.9663
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60162.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS251.33.7e-772115915374
        GRAS   5 LlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIl 103
                 Ll++  a++ gdle+a +lLa ++++  p++dp+q l+a +   L+  ++          +  + ++  s ++  a++++++  P++k++ ++aN aIl
  PKA60162.1 211 LLNATWAIRRGDLEAAAHLLAAVKKTIEPSADPVQLLVATMFHSLRFLMQP------PPAAGLKFTDVCSRKQQVATQILHNKNPCFKLAVMAANMAIL 303
                 8889999***************************************99999......222333333334777888999********************* PP

        GRAS 104 eavegeervHiiDfdisqGlQWpaLlqaLa......sRpegppslRiTgvgspesg..........skeeleetgerLakfAeelgvpfefnvlvakrl 186
                  +  +  ++Hi+Dfd+++G+Q  +L++a+a      +R+e+pps++iT+v +p+              + l+++g+rLa+ Ae+l++ ++f+v+   ++
  PKA60162.1 304 MESYHLPKIHILDFDVGNGGQLSSLIHAMAmwhlnvERSEPPPSIKITAVYDPAFPfnssisdageTMRHLHSVGQRLAERAEKLNILLRFSVF-NCET 401
                 ****************************984333344779************875578889999999999**********************95.7789 PP

        GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                 ++l+  +L ++p Ea+ Vn+++ l rl+de+vs e++rd+vL++vk l+P vv +veq++d n++s+ +rf+ea ++y  l++sl+  + r s+er+++
  PKA60162.1 402 HELNRGNLGCEPVEAIFVNMAFFLSRLPDETVSPENPRDRVLRQVKALEPIVVAMVEQDLDVNGGSLTRRFMEAYQHYRPLLESLDFMAERGSSERSWL 500
                 *************************************************************************************************** PP

        GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee..sgslvlgWkdrpLvsvSaWr 374
                 +   l+r+  nvva +g +r+er+e  + W +r+++aGF+ +p+++ ++  ++l l+ v  + gy+v+++   g++  gWk+r+Lv +S Wr
  PKA60162.1 501 DGC-LARKMANVVARSGPDRVERQELHAIWLDRMMRAGFERIPIRSMVVRLVQLRLNAVReNPGYTVNHNarGGWVGCGWKGRTLVIASTWR 591
                 976.********************************************************99*****9553256666**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 591 aa     Download sequence    
MEPALRELMN YSSMDVCGSD GSCTDEADGL WIVPMDVDGE SQPPLTSPSL PPPPSENSRF  60
LTLHHQPSSG RYLPGRRITT IRDYPISPPA TLQMLGDVHH FVTPPPEFQT FQRGGSHIIF  120
PPRPLRPPPP PQALPVLQEY SECLALPLPL PLPLPLPQAY PAAPGPLPPL PPGPPRPQRW  180
RLPRRTVRRH QSCHPSASRA AQSLLEKKIK LLNATWAIRR GDLEAAAHLL AAVKKTIEPS  240
ADPVQLLVAT MFHSLRFLMQ PPPAAGLKFT DVCSRKQQVA TQILHNKNPC FKLAVMAANM  300
AILMESYHLP KIHILDFDVG NGGQLSSLIH AMAMWHLNVE RSEPPPSIKI TAVYDPAFPF  360
NSSISDAGET MRHLHSVGQR LAERAEKLNI LLRFSVFNCE THELNRGNLG CEPVEAIFVN  420
MAFFLSRLPD ETVSPENPRD RVLRQVKALE PIVVAMVEQD LDVNGGSLTR RFMEAYQHYR  480
PLLESLDFMA ERGSSERSWL DGCLARKMAN VVARSGPDRV ERQELHAIWL DRMMRAGFER  540
IPIRSMVVRL VQLRLNAVRE NPGYTVNHNA RGGWVGCGWK GRTLVIASTW R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.13e-67GRAS family protein