PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA59914.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

BES1

Protein Properties

Length: 364aa MW: 39275.2 Da PI: 8.7484

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA59914.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	166	2.3e-51	4	116	2	116
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq.sslk 99 g+gr+ptwkErEnnkrRERrRRaiaaki++GLR Gnyklpk++DnneVlkALc eAGwvvedDGttyrk p ss+s sp s l+ + l+ PKA59914.1 4 GGGRMPTWKERENNKRRERRRRAIAAKIFTGLRTLGNYKLPKHCDNNEVLKALCVEAGWVVEDDGTTYRKVRPPA----CSSSSSSSSPGSTLNfLLLR 98 89*******************************************************************876666....45555555555555542222 PP DUF822 100 .ssalaspvesysaspks 116 s + s +s+s++s PKA59914.1 99 tQSFVGSSYIFSSSSLNS 116 022233333333444444 PP
2	DUF822	34.3	8.4e-11	132	211	72	145
DUF822 72 gskpl...eeaeaagssasaspesslq.sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlsl 145 g+kp+ e +++ +++sp+ss++ +s+ ss+++spv+sy+asp+sssfpsp+++++ ++ + llp+l++ls+ PKA59914.1 132 GCKPPpppPEGAIGAPLTHISPCSSSHhLSPPSSSFPSPVPSYHASPASSSFPSPTRAENYNNPAVnpSYLLPFLRNLSS 211 67777653445555566779***999***************************99876643345999999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MTSGGGRMPT WKERENNKRR ERRRRAIAAK IFTGLRTLGN YKLPKHCDNN EVLKALCVEA 60 GWVVEDDGTT YRKVRPPACS SSSSSSSPGS TLNFLLLRTQ SFVGSSYIFS SSSLNSDTVP 120 CGNSSLCKLL AGCKPPPPPP EGAIGAPLTH ISPCSSSHHL SPPSSSFPSP VPSYHASPAS 180 SSFPSPTRAE NYNNPAVNPS YLLPFLRNLS SLPPLRISNS APVTPPLSSP TSSRPLKLKK 240 PDWGYDAGNR HPLFAASAPA SPTRSRRHLH PATIPECDES DASTIDSGRW VTFQNTAPAS 300 PTFNLINPTA AMPLESAVCV GGKLERCRGA AEFEFECKRV KPWEGERIHE VGTEEEDLEL 360 TLGL

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MTSGGGRMPT WKERENNKRR ERRRRAIAAK IFTGLRTLGN YKLPKHCDNN EVLKALCVEA  60
GWVVEDDGTT YRKVRPPACS SSSSSSSPGS TLNFLLLRTQ SFVGSSYIFS SSSLNSDTVP  120
CGNSSLCKLL AGCKPPPPPP EGAIGAPLTH ISPCSSSHHL SPPSSSFPSP VPSYHASPAS  180
SSFPSPTRAE NYNNPAVNPS YLLPFLRNLS SLPPLRISNS APVTPPLSSP TSSRPLKLKK  240
PDWGYDAGNR HPLFAASAPA SPTRSRRHLH PATIPECDES DASTIDSGRW VTFQNTAPAS  300
PTFNLINPTA AMPLESAVCV GGKLERCRGA AEFEFECKRV KPWEGERIHE VGTEEEDLEL  360
TLGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19350.5	4e-25	BES1 family protein