PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA59887.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 446aa    MW: 48781.6 Da    PI: 6.377
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA59887.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS300.24.9e-92614432373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lLl+cA a++++d++laq++L+ l+++a pdgdp+qRl+a f++AL  r +rs+s + +  ++ ++++      + al  f++++P+++f++ +aN 
  PKA59887.1  61 EQLLLHCAYAIEANDATLAQQILWVLHNIAPPDGDPNQRLTAAFVRALILRASRSGSPCGSLASTVAAQDAPLCLPAVALAGFVDLTPWHRFGFTAANA 159
                 79**********************************************************9999888887778888888888***************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvl...vakrledlel 191
                 aI +a+++   +Hi+D+  ++ +Q p+L+++La+Rp+gp  +R+T+++++ ++      +++   +g+rL +fA++ +v +ef+ +    ++ l++l +
  PKA59887.1 160 AIADATDSFPVIHIVDLTTTYSMQIPTLIDSLACRPDGPRFIRLTVISPSPANsppptLETSFDDLGSRLVNFARSRNVGMEFRQVpasPSDGLDAL-V 257
                 ***********************************************99665578888889999*********************954323344444.8 PP

        GRAS 192 eeLrvkp....gEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                 ++Lrv++    gEal++n++++lh++++e+v  +   +r ++Lk+++ l+P++vvvv+++a+ +s++ + r+  a++y +  f+++++ lp++s++r+ 
  PKA59887.1 258 RHLRVQQlvavGEALVINCHMMLHYIPEETVGNSTfsQRITFLKALRALEPTLVVVVDEDANFTSGDVVGRIRAAFNYLWIPFEAVDSFLPKDSQQRHR 356
                 89999989999******************998877779************************************************************* PP

        GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 +E + ++++i+n++a+eg +r+er et ++W +++++ GF+ v ++e+aa+++k +l++++  g+ ++++++ lvl+Wk++  v++SaW
  PKA59887.1 357 YESA-IRWKIENLIAMEGIQRVERLETRGRWVQKMRRLGFRGVGFGEEAAAEVKGVLEEHS-AGWGMKKDEERLVLTWKGHDAVFASAW 443
                 ****.*******************************************************9.8999*********************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    
MMQFTESAAA SPFSGSESPP AGLLLNLNGG PNSHAGDWPW PHYPASGKTS LGRYNSGAFM  60
EQLLLHCAYA IEANDATLAQ QILWVLHNIA PPDGDPNQRL TAAFVRALIL RASRSGSPCG  120
SLASTVAAQD APLCLPAVAL AGFVDLTPWH RFGFTAANAA IADATDSFPV IHIVDLTTTY  180
SMQIPTLIDS LACRPDGPRF IRLTVISPSP ANSPPPTLET SFDDLGSRLV NFARSRNVGM  240
EFRQVPASPS DGLDALVRHL RVQQLVAVGE ALVINCHMML HYIPEETVGN STFSQRITFL  300
KALRALEPTL VVVVDEDANF TSGDVVGRIR AAFNYLWIPF EAVDSFLPKD SQQRHRYESA  360
IRWKIENLIA MEGIQRVERL ETRGRWVQKM RRLGFRGVGF GEEAAAEVKG VLEEHSAGWG  420
MKKDEERLVL TWKGHDAVFA SAWVPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-143GRAS family protein