PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA59606.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 477aa MW: 51096.9 Da PI: 8.6327 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.5e-19 | 226 | 276 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge PKA59606.1 226 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAALAYDREAFKLRGE 276 59******9.**********955...5**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence |
MEGARKVGGG MQRGGSGEDG RRLKGKGVLQ LETVTGRMVA ERQAQAPAPV FSEAPAAFRP 60 LKKIRSPDRY SSNPVSPSSS SSLPVLASAS SSWTSPPIFP FACEASPSPA QSPVLPLFPS 120 NQHYHQQQMI SFSQNQSYPM GSFPTSSSSS PLLLREASSA IATTQQQLYS EQLLRYWSEV 180 LNLSPRGHMM MMSRLAGQEG RGRSPSSLYS SLFRHPFRGV PAPAKLYRGV RQRHWGKWVA 240 EIRLPRNRTR LWLGTFDTAE DAALAYDREA FKLRGENARL NFPNLFLGKS AAGDSSGVGG 300 SREGASSSSS SISAPPTPDD PLPEPRGQRR HRPPDSVDGD RPGQTLLEKE TKTDDAPSSK 360 HEGSPLRESP VEPATATGTV MAGHCSAGTE LVWSEAEEAW FSAWGPGSSL WDDIDGAGSL 420 LFQSRLASVP EIPQEIANAA GEPATAPAQG TDAAAASSSS SPSSLSYPSS IFMWKDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20880.1 | 7e-40 | ERF family protein |