PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA59602.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 587aa    MW: 62656.8 Da    PI: 7.5522
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA59602.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS322.49.4e-992085872374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++ Ll+ A+a+s+g++e a + +a l+ +a+p+gdp qRl+a+++ AL +r++    +++     ++ ++  s+e+ aa+++++evsP++k++ ++aN 
  PKA59602.1 208 RQMLLDTATAISEGNMETAASNIALLKRTANPRGDPDQRLTAMMVSALISRINPPAAGIS-----TPVTDVCSVEHQAATQILYEVSPCFKLGLMAANL 301
                 689***************************************************555555.....333333489999********************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRp.....egpp.slRiTgvgspesg.......skeeleetgerLakfAeelgvpfefnvlvakrl 186
                 aIlea++ ++++Hi+Dfd++qG+Q ++L +++a+R+     + pp s++iT+v++p+          + +l+ +g+rLa++Ae+l++ ++f++ v +r+
  PKA59602.1 302 AILEATKDHSKIHILDFDVGQGAQLASLVHSIADRQrhdspSRPPiSVKITAVVDPSFPftsagsaGSSNLSLVGDRLANMAERLRLGLRFSI-VNRRI 399
                 *********************************9997776644556*********98657889999999***********************9.79*** PP

        GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                 ++l+ ++L +++gEalaVn+ + l r+ desvs +++rde+L+ vk l P +v +veq+++ n+++F+ rf+ea+ +y +l++sl+a+++res er+ v
  PKA59602.1 400 HELDRSSLCCESGEALAVNFPFLLSRVADESVSPANPRDELLRRVKALHPLIVAMVEQDMNGNTAPFAVRFSEACAHYGSLLESLDATAGRESGERTRV 498
                 *************************************************************************************************** PP

        GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 E+  l+r++ n va  g++r+er+e ++kWr+r+++aGF+pv+l++ +a+ +kl l+ +  + g++v ee+g +  gW++r ++++SaWr
  PKA59602.1 499 EAG-LARKAANSVARDGSDRIERCEVYGKWRARMGMAGFHPVQLGSAVAEPVKLRLASIRnNPGFTVREEDGRIGSGWMGRVITVASAWR 587
                 ***.9*******************************************************99***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    
MASGGLSGRD LRGGSAVQLP YQQRSSGGVV VGTGGILKRS LTEMERQQQI QQAIFLRSVK  60
QKTHLAAPIF PLSQADFSAA TSSSSVLSSI SSASMPNSFS WSFPSARSAV EIDSEKKSTM  120
TSRLLELERH LLDDDDDEEI SVSGSAFSSS EWSETMKSLI SPLQPLLQPT MTANQSPLSP  180
SPTTSSSSSS CSSSSSCSPS SSAPVGSRQM LLDTATAISE GNMETAASNI ALLKRTANPR  240
GDPDQRLTAM MVSALISRIN PPAAGISTPV TDVCSVEHQA ATQILYEVSP CFKLGLMAAN  300
LAILEATKDH SKIHILDFDV GQGAQLASLV HSIADRQRHD SPSRPPISVK ITAVVDPSFP  360
FTSAGSAGSS NLSLVGDRLA NMAERLRLGL RFSIVNRRIH ELDRSSLCCE SGEALAVNFP  420
FLLSRVADES VSPANPRDEL LRRVKALHPL IVAMVEQDMN GNTAPFAVRF SEACAHYGSL  480
LESLDATAGR ESGERTRVEA GLARKAANSV ARDGSDRIER CEVYGKWRAR MGMAGFHPVQ  540
LGSAVAEPVK LRLASIRNNP GFTVREEDGR IGSGWMGRVI TVASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-109GRAS family protein