PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA59519.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 470aa    MW: 51438.3 Da    PI: 5.7009
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA59519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS251.82.5e-77794601373
        GRAS   1 lvelLlecAeavssgdl..elaqalLarlsel.....aspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                 l++lL+++Aea++ g++  ela+ +L rl el     ++ +g ++++Rl+a+f  AL+  + + + +  +    +  +   s+e+l+a++l +++ P  
  PKA59519.1  79 LIHLLMAAAEALTGGQKgrELARVILVRLGELvvpaaSAASGaTSIERLVAHFIGALQGIVDGAGRGQIH----RGFP---SDEALQAFQLAQDMLPDD 170
                 689*********98664116***********9555432223346***************99994443332....3333...67899************* PP

        GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvlva 183
                 k++h+taNq Ilea++ge+r+H++D+di++GlQW +L+qa+ sR+  ++ppslRiT+v+  +s      s+e+++ tg+rL +fAe++g p+ f     
  PKA59519.1 171 KLGHFTANQSILEAAAGERRIHVVDYDIKEGLQWSSLMQAMVSRKdgAPPPSLRITAVSGGRSAgkgrwSSETIQVTGQRLMEFAESIGQPLTFGYCRL 269
                 *********************************************777789*******997777899*****************************999 PP

        GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse........sFlerflealeyysalfdsleak 274
                 +r +++++ ++rv +gEal  n++l   +++++++++     ++L    +l +++v+v+ +e   +s+         F++rf+e l+ ysa +++lea+
  PKA59519.1 270 DRRQMFRPATIRVVKGEALFFNSALLQPEFHQRTTASVR---SFLTGAAELGARLVTVIKEERASGSAvivgeeneGFVRRFTEQLQRYSAKMEALEAE 365
                 9************************88888866555555...9*******************87777777777777*********************** PP

        GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveees.gslvlgWkdrpLvsvSa 372
                 +p++ ++r +vEr +l+++++ +++++  er+e +e+l +   ++ +aGF+pv+ls ++ +qa+lll  ++ +gyrvee+  + ++l Wk+r+L+s+S+
  PKA59519.1 366 FPKQGRAREMVERLILAPSVRVALSTAYCEREEPEESL-E---WMPAAGFRPVELSFFNLCQARLLLGLFN-QGYRVEEDApNKITLSWKSRRLLSASV 459
                 ******************************77766655.4...599*************************.99****99615566************* PP

        GRAS 373 W 373
                 W
  PKA59519.1 460 W 460
                 * PP
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MEVFMDDAAA LQISYSFSAA SHADVHSLAS FFGDDQDEFY CDHLRNVESS SAISASSYSS  60
PPPAEYQWPA VAGDENLRLI HLLMAAAEAL TGGQKGRELA RVILVRLGEL VVPAASAASG  120
ATSIERLVAH FIGALQGIVD GAGRGQIHRG FPSDEALQAF QLAQDMLPDD KLGHFTANQS  180
ILEAAAGERR IHVVDYDIKE GLQWSSLMQA MVSRKDGAPP PSLRITAVSG GRSAGKGRWS  240
SETIQVTGQR LMEFAESIGQ PLTFGYCRLD RRQMFRPATI RVVKGEALFF NSALLQPEFH  300
QRTTASVRSF LTGAAELGAR LVTVIKEERA SGSAVIVGEE NEGFVRRFTE QLQRYSAKME  360
ALEAEFPKQG RAREMVERLI LAPSVRVALS TAYCEREEPE ESLEWMPAAG FRPVELSFFN  420
LCQARLLLGL FNQGYRVEED APNKITLSWK SRRLLSASVW SPPAVAPANS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-98GRAS family protein