PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA59518.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 502aa    MW: 54831.7 Da    PI: 4.5808
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA59518.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS283.84.8e-871164902373
        GRAS   2 velLlecAeavss..gdlelaqalLarlselaspdgd......pmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                 ++lL+++Aea+s   ++  la+ +Larl+el sp+++       m+Rla +f++AL++ ++       +  ++   ++ + ++ l+a +l++++sP +k
  PKA59518.1 116 IHLLTAAAEALSGepKNEVLARVILARLNELLSPAKScgdsagGMERLALHFANALSRLVLAG---EGEEWQSGGFRHPSAVDMLTASQLLQDLSPSVK 211
                 79*********984456669***********8888766678889***************9993...3333444444444489***************** PP

        GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                 f+h+taNqaIleav+ge+rvHi+Dfdi++G QW++L+qa+ s +  +pp +l+iT+v +   +s+  ++etg+rLa+fA+++g+pf+f     +r   +
  PKA59518.1 212 FGHFTANQAILEAVAGERRVHIVDFDIMEGSQWAPLFQAFVSTKdFPPPsHLKITAVTR-CRKSAADVQETGRRLAEFAQSVGLPFSFAQCRLDRDGGF 309
                 ****************************************9655355556*********.557999************************9999***** PP

        GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpreseerikvEr 287
                 ++ +++v++ Ea++ n++++ ++ l++ +++     ++L    ++ +++v++ve++    ++++ +  f++ l+ ysa+ d+++a++    +++ +vEr
  PKA59518.1 310 RPAAIKVSRAEAVVFNCAIHSQHQLHHAAASVR---SFLAGAAEIGARLVTLVEEDGRSaDDGDVVGWFMRELQRYSAMWDAMDASFQVRGRAMEMVER 405
                 ******************999988855555555...8*******************99989************************************** PP

        GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.eesgslvlgWkdrpLvsvSaW 373
                 ++++++i ++v  + + r+e+   ++ W+e++ +aGF+ v ls ++++qaklll  ++ dgy+++ ee + lvl Wk   Lv+vS+W
  PKA59518.1 406 VIFAPRIAEIVERALR-RTEEDFAAAGWSEWMAAAGFRRVGLSFFNQMQAKLLLGVFN-DGYEIDdEEPNKLVLRWKLCGLVAVSVW 490
                 ***********99888.6899999**********************************.*****967789999************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 502 aa     Download sequence    
MEIVMEEVGE LIFSDCLIST ASIPFGNDFA WADWTSAFAV GQISGEDDFH DLKDTMSWDS  60
VAVDLEYLTA GSSPETYDYC SSNVCESTNS SNAGTPALEP PESASSGQDD KWVRAIHLLT  120
AAAEALSGEP KNEVLARVIL ARLNELLSPA KSCGDSAGGM ERLALHFANA LSRLVLAGEG  180
EEWQSGGFRH PSAVDMLTAS QLLQDLSPSV KFGHFTANQA ILEAVAGERR VHIVDFDIME  240
GSQWAPLFQA FVSTKDFPPP SHLKITAVTR CRKSAADVQE TGRRLAEFAQ SVGLPFSFAQ  300
CRLDRDGGFR PAAIKVSRAE AVVFNCAIHS QHQLHHAAAS VRSFLAGAAE IGARLVTLVE  360
EDGRSADDGD VVGWFMRELQ RYSAMWDAMD ASFQVRGRAM EMVERVIFAP RIAEIVERAL  420
RRTEEDFAAA GWSEWMAAAG FRRVGLSFFN QMQAKLLLGV FNDGYEIDDE EPNKLVLRWK  480
LCGLVAVSVW SARPSQPSPP AE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-85GRAS family protein