PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA59517.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 527aa    MW: 56198.5 Da    PI: 4.6768
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA59517.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS304.72.1e-931175001373
        GRAS   1 lvelLlecAeavssgdle..laqalLarlsel....aspdg..dpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklfsevsPi 90 
                 +v+lL+++Aea+s + ++  laq +Larl+el    a++ g  ++m Rlaa+f  AL+  l +           +++ e n   + l a++l+ ++sP+
  PKA59517.1 117 MVHLLMAVAEALSGSANSgdLAQVILARLKELvvtaAASGGaaTSMVRLAAHFSDALQGILDG--------AGGWASGEANcPGDLLEAFRLLEDMSPY 207
                 689*********98666656***********97764333334569****************99........222222222337899************* PP

        GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                 +kf+h+taNqaIleav+ge+r+Hi+D+d+++G+QWp+L+qaL sR+   ++p+l+iT+v  +     s+ +++etg+rLa fA+++g+pf+f +   + 
  PKA59517.1 208 VKFGHFTANQAILEAVAGERRLHIVDYDVMEGAQWPSLMQALMSRNdgLPTPRLKITAVTGSGRCrrSAATVQETGRRLAGFAASIGLPFSFCLCRLDY 306
                 **********************************************444578*******996655899**************************88889 PP

        GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse.........sFlerflealeyysalfdsleakl 275
                  e++++ + ++ +gEa++ n+v++  +l+++ +++     ++L    +l +++v++ve+ea+  ++          F +rfl+ l+ ysa++dslea++
  PKA59517.1 307 DETFRPATVKTVKGEAVVLNCVINPPHLPHHAAASVG---SFLAGATELGARLVTIVEEEASAAAAggggdggdeGFTARFLDELQRYSAILDSLEAGF 402
                 9999*************************77666666...9*******************776544466677777************************ PP

        GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaW 373
                 p ++++r++vE+++lg++i  +v  + ++r+e +  ++ W+er+e+aGF+ v ls ++ +qa+lll  ++ dgyrveee  + lvl+Wk+ +L+s+S+W
  PKA59517.1 403 PMQDRARRVVEKVILGPRIAGAVGRAYRQRVEGEMAAKGWSERVEAAGFRRVGLSFFNLCQARLLLGLFN-DGYRVEEEaPNKLVLCWKSCRLFSTSVW 500
                 **********************************************************************.******77478999************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    
MQRHSQPKAQ RGKLDSIAMD CLMEQMISNM DADDMGWSGW SPELDWTAFA GAASFDDGDV  60
DIVQSMRCKD EDYGLDGAPP LHEWSTSASA SSAGTPTEDT TAVALDAGGE DDRGLRMVHL  120
LMAVAEALSG SANSGDLAQV ILARLKELVV TAAASGGAAT SMVRLAAHFS DALQGILDGA  180
GGWASGEANC PGDLLEAFRL LEDMSPYVKF GHFTANQAIL EAVAGERRLH IVDYDVMEGA  240
QWPSLMQALM SRNDGLPTPR LKITAVTGSG RCRRSAATVQ ETGRRLAGFA ASIGLPFSFC  300
LCRLDYDETF RPATVKTVKG EAVVLNCVIN PPHLPHHAAA SVGSFLAGAT ELGARLVTIV  360
EEEASAAAAG GGGDGGDEGF TARFLDELQR YSAILDSLEA GFPMQDRARR VVEKVILGPR  420
IAGAVGRAYR QRVEGEMAAK GWSERVEAAG FRRVGLSFFN LCQARLLLGL FNDGYRVEEE  480
APNKLVLCWK SCRLFSTSVW SAPAAAPPSA LVPAGFSFEE SELFNFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-104GRAS family protein