PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA59446.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB | ||||||||
Protein Properties | Length: 334aa MW: 37639.9 Da PI: 6.9552 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.4 | 7.1e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W++I+ g+ R+ k+c++rw +yl PKA59446.1 14 KGPWTPEEDIILVSYINEHGPGNWRSIPLNSGLSRCSKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.5 | 9.5e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E++l+v++ ++lG++ W++Ia++++ Rt++++k++w+++l PKA59446.1 67 RGSFTDKEEKLIVHLQALLGNR-WAAIASYLP-DRTDNDIKNYWNTHL 112 899*******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MGRPPCCEKT GLKKGPWTPE EDIILVSYIN EHGPGNWRSI PLNSGLSRCS KSCRLRWTNY 60 LRPGIKRGSF TDKEEKLIVH LQALLGNRWA AIASYLPDRT DNDIKNYWNT HLKKKMIKEL 120 AMGDECSNRC EPLIGRGQWE RTLQTDIKMA KRALHEALTM ENPTFLRMNQ LVYPTASTTT 180 TLLTASTSDD DDDHHHHHHH HQPPSTYASS TSNIARLLKN WPSKSNYSPN YYNTTAGATV 240 PSRANSSHSK NSSAAVAGAD STSSDGTTAS SKVESHEDQL PFKKETSKLQ GFEADQLPFS 300 ILESWLFDDE NYDQEYESNL IHDMTMHDAS VLFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47600.1 | 9e-90 | MYB family protein |