PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA59281.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | LBD | ||||||||
Protein Properties | Length: 229aa MW: 23865.1 Da PI: 8.7411 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 133.2 | 1e-41 | 33 | 132 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +Ca+Ck+lrrkC++dC+++pyf a+qp+kf vh++FGasnv kll++l++++reda++sl+yeAe+r+rdPvyG+vgvi+ lq++l+ql+ +l+++++ PKA59281.1 33 PCAGCKFLRRKCQPDCIFSPYFHADQPHKFISVHRVFGASNVAKLLAELRPDQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQRDLRQLQLQLSYARA 131 7**********************************************************************************************9988 PP DUF260 100 e 100 e PKA59281.1 132 E 132 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MTSSSASSVS RHPAASNPSF PPATTVLSIG SSPCAGCKFL RRKCQPDCIF SPYFHADQPH 60 KFISVHRVFG ASNVAKLLAE LRPDQREDAV NSLAYEAEMR LRDPVYGCVG VISLLQRDLR 120 QLQLQLSYAR AELARYHSAA AAAAAAAGSH QFVNINAGVL GAVAADHHLG FLRGQEGAQM 180 AARLAVNAAA YEAAPVINGT VNSASVAAGL GLLGGQLMRP SAAGGDANL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65620.3 | 2e-49 | LBD family protein |