PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA59154.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 167aa MW: 19234.9 Da PI: 8.3485 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.9 | 2.6e-18 | 7 | 54 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 +y+GVr+++ +g+Wv+eIr+ps ++r++lg+f tae Aa+a+++a + + PKA59154.1 7 RYRGVRQRH-WGSWVSEIRHPSL---KTRIWLGTFETAEAAARAYDEASRVM 54 69******9.**********944...5********************97765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MARPHQRYRG VRQRHWGSWV SEIRHPSLKT RIWLGTFETA EAAARAYDEA SRVMCGPKAK 60 TNFPFDPSIP PSSSNLLSAT LMAKLRRCHL SSLQASQPGP RHLLAGEDLF RRKEAEEVVM 120 RNEERKPVKG MDDTLKKFRD LEEDDIEKMI EELLDSDHCL EFCSRAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25190.1 | 1e-39 | ERF family protein |