PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA58952.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | NF-YB | ||||||||
Protein Properties | Length: 120aa MW: 13379.3 Da PI: 4.655 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 154 | 2.7e-48 | 23 | 115 | 1 | 93 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 +re+drflPi ++rim+k++P+n+ki+++ake vqecv+efisf+tsea dkcq+e+rkti+gddl+wal++lGfe+yveplk+yl+ yre+ PKA58952.1 23 MREHDRFLPIVGIGRIMRKAIPENGKIAREAKEFVQECVTEFISFITSEAVDKCQKEERKTITGDDLVWALSSLGFEEYVEPLKLYLQLYREV 115 589****************************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence |
MAGPSPESST SGDHGNDAVV GGMREHDRFL PIVGIGRIMR KAIPENGKIA REAKEFVQEC 60 VTEFISFITS EAVDKCQKEE RKTITGDDLV WALSSLGFEE YVEPLKLYLQ LYREVIVSLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38880.6 | 2e-51 | NF-YB family protein |