PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58946.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family TCP
Protein Properties Length: 319aa    MW: 34443.2 Da    PI: 7.4169
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP117.32e-3619102285
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasns 85 
                 +g+kdrhsk++T++g RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++++ ++s++e++ss +++ + 
  PKA58946.1  19 TGRKDRHSKVCTAKGTRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKAAIDELAELPAWQPSAAEPSSSAVNNPHL 102
                 79**************************************************************88888777666666666543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MRVTGEIVEV HGGHIVRSTG RKDRHSKVCT AKGTRDRRVR LSAHTAIQFY DVQDRLGYDR  60
PSKAVDWLIK NAKAAIDELA ELPAWQPSAA EPSSSAVNNP HLPDPQIPGS CVDGGSNSSF  120
IPPSLDSDAI ADTIKSLFPV TAAASAGVPP PSSSPPFSFH NYPPEFLSRR SYQYQDLRLS  180
LQSFQDPIFH QNPAASGSHQ AVFPSAPTHF SFNAGSSTFS DQCQSTGSWN AALPPQALAL  240
QPFLFSQGQI FPQRGPLQSS NSPPLRPWTE PIDHQTASTF GFSSSVGLPR FRIPARIHGE  300
EEHGGMSEKP SSGSSASYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.22e-77TCP family protein