PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA58622.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

HB-other

Protein Properties

Length: 377aa MW: 43237.9 Da PI: 7.2998

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA58622.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59	7.8e-19	19	75	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + kR t+ q+++Le+++++++yps++++ e A+++gL+e+qV+ WF+ rR+kekk PKA58622.1 19 KAKRKVKTPAQVDALEKFYNEHKYPSEAMKMEFAERVGLSEKQVSGWFCHRRQKEKK 75 56999***************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MEGFCEAMGE EGDISCHEKA KRKVKTPAQV DALEKFYNEH KYPSEAMKME FAERVGLSEK 60 QVSGWFCHRR QKEKKLLQGE LKSIGKKNLS SSALHDGISG IRQESCCSTK QADRNLDSKE 120 VESKMFYGCE SSSVMFECQG SNQHAYLGDY HVSDNRSSGS SSASLKRSVQ KAENIRVTQP 180 SRCSIWADGN MLMSNINAKG DSKRHPVNSR YPFLQDESEN HAISAVKWKL GRNYREDGPQ 240 LAIEFDPLPP DAFDSPIHDT NCDQYYIGST RHEASSMYRS MNEPKMFYRY RLQEPVIKSI 300 PEQRGFERTK QRLNDCNEIR KLQSTQKTFS SSHTDHSRSQ IFGTDVDEDF AEEQDQNGRS 360 TRNYFGNQNE IYWRNGI

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MEGFCEAMGE EGDISCHEKA KRKVKTPAQV DALEKFYNEH KYPSEAMKME FAERVGLSEK  60
QVSGWFCHRR QKEKKLLQGE LKSIGKKNLS SSALHDGISG IRQESCCSTK QADRNLDSKE  120
VESKMFYGCE SSSVMFECQG SNQHAYLGDY HVSDNRSSGS SSASLKRSVQ KAENIRVTQP  180
SRCSIWADGN MLMSNINAKG DSKRHPVNSR YPFLQDESEN HAISAVKWKL GRNYREDGPQ  240
LAIEFDPLPP DAFDSPIHDT NCDQYYIGST RHEASSMYRS MNEPKMFYRY RLQEPVIKSI  300
PEQRGFERTK QRLNDCNEIR KLQSTQKTFS SSHTDHSRSQ IFGTDVDEDF AEEQDQNGRS  360
TRNYFGNQNE IYWRNGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	1e-48	HB-other family protein