PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58208.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 527aa    MW: 58644.4 Da    PI: 6.3107
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58208.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS451.94.1e-1381575271374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l+++Ll+cA+a++++d + a++l+++l++l+s +g+p+qRl ay++e+L ar+++s+s +ykal+++e +   sse l+++++++ev+P++kf+++ aN
  PKA58208.1 157 LKQALLACARALADNDITVAEWLMTELRQLVSVSGEPIQRLGAYLLEGLVARISSSGSAIYKALNCEEPA---SSELLSYMHILYEVCPYFKFGYMSAN 252
                 6799*****************************************************************9...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  aI eav++e+rvHiiDf i qG QW++L+qaLa+Rp+gpp++RiTg++++ s   +   l+ +g+rL ++Ae+++vpfef+  +a +  +++le+Lr+
  PKA58208.1 253 GAIAEAVKNEDRVHIIDFHIAQGSQWVTLIQALAARPGGPPHIRITGIDDSVSAyaRGGGLHIVGQRLFHLAESCKVPFEFHS-AAMSGCEVKLENLRI 350
                 **************************************************888899999************************.89999********** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                  +gEal+Vn+++qlh+++desvs++++rd++L+lvkslsPkvv++veqe+++n++ F  rf+e+l+yy+a+f+s++++ pre++eri+vE+++l+r+iv
  PKA58208.1 351 CSGEALVVNFAFQLHHIPDESVSTTNHRDTLLRLVKSLSPKVVTLVEQESNTNTTAFYPRFAETLDYYTAIFESIDVTRPRENKERISVEQHCLARDIV 449
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 n++acegaer+erhe  +kW++rl++aGF p pls  +++++k+ll+k++++ y++ee++g+l+lgW++r Lv+ SaWr
  PKA58208.1 450 NIIACEGAERVERHELHGKWKARLKMAGFAPFPLSPLVNSTIKSLLEKYNDK-YTLEERDGALFLGWMNRDLVVSSAWR 527
                 **************************************************55.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    
MSTSRVTSLV SFTPMQASEN HGTPGKSQYS HSLRDSMHLR ESGTHFLPQN TLLSHDESQQ  60
KKLDSKFSTV RYCTLESSSA VADHIHSLQS NTSSSSASDS YSDHTYGSPI CTSCISEDQN  120
DLKYKLKELE CVMLGPENVV DSFNAFNILM EIPRGDLKQA LLACARALAD NDITVAEWLM  180
TELRQLVSVS GEPIQRLGAY LLEGLVARIS SSGSAIYKAL NCEEPASSEL LSYMHILYEV  240
CPYFKFGYMS ANGAIAEAVK NEDRVHIIDF HIAQGSQWVT LIQALAARPG GPPHIRITGI  300
DDSVSAYARG GGLHIVGQRL FHLAESCKVP FEFHSAAMSG CEVKLENLRI CSGEALVVNF  360
AFQLHHIPDE SVSTTNHRDT LLRLVKSLSP KVVTLVEQES NTNTTAFYPR FAETLDYYTA  420
IFESIDVTRP RENKERISVE QHCLARDIVN IIACEGAERV ERHELHGKWK ARLKMAGFAP  480
FPLSPLVNST IKSLLEKYND KYTLEERDGA LFLGWMNRDL VVSSAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein