PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA58208.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 527aa MW: 58644.4 Da PI: 6.3107 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 451.9 | 4.1e-138 | 157 | 527 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 l+++Ll+cA+a++++d + a++l+++l++l+s +g+p+qRl ay++e+L ar+++s+s +ykal+++e + sse l+++++++ev+P++kf+++ aN PKA58208.1 157 LKQALLACARALADNDITVAEWLMTELRQLVSVSGEPIQRLGAYLLEGLVARISSSGSAIYKALNCEEPA---SSELLSYMHILYEVCPYFKFGYMSAN 252 6799*****************************************************************9...9************************* PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196 aI eav++e+rvHiiDf i qG QW++L+qaLa+Rp+gpp++RiTg++++ s + l+ +g+rL ++Ae+++vpfef+ +a + +++le+Lr+ PKA58208.1 253 GAIAEAVKNEDRVHIIDFHIAQGSQWVTLIQALAARPGGPPHIRITGIDDSVSAyaRGGGLHIVGQRLFHLAESCKVPFEFHS-AAMSGCEVKLENLRI 350 **************************************************888899999************************.89999********** PP GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295 +gEal+Vn+++qlh+++desvs++++rd++L+lvkslsPkvv++veqe+++n++ F rf+e+l+yy+a+f+s++++ pre++eri+vE+++l+r+iv PKA58208.1 351 CSGEALVVNFAFQLHHIPDESVSTTNHRDTLLRLVKSLSPKVVTLVEQESNTNTTAFYPRFAETLDYYTAIFESIDVTRPRENKERISVEQHCLARDIV 449 *************************************************************************************************** PP GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 n++acegaer+erhe +kW++rl++aGF p pls +++++k+ll+k++++ y++ee++g+l+lgW++r Lv+ SaWr PKA58208.1 450 NIIACEGAERVERHELHGKWKARLKMAGFAPFPLSPLVNSTIKSLLEKYNDK-YTLEERDGALFLGWMNRDLVVSSAWR 527 **************************************************55.*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 527 aa Download sequence |
MSTSRVTSLV SFTPMQASEN HGTPGKSQYS HSLRDSMHLR ESGTHFLPQN TLLSHDESQQ 60 KKLDSKFSTV RYCTLESSSA VADHIHSLQS NTSSSSASDS YSDHTYGSPI CTSCISEDQN 120 DLKYKLKELE CVMLGPENVV DSFNAFNILM EIPRGDLKQA LLACARALAD NDITVAEWLM 180 TELRQLVSVS GEPIQRLGAY LLEGLVARIS SSGSAIYKAL NCEEPASSEL LSYMHILYEV 240 CPYFKFGYMS ANGAIAEAVK NEDRVHIIDF HIAQGSQWVT LIQALAARPG GPPHIRITGI 300 DDSVSAYARG GGLHIVGQRL FHLAESCKVP FEFHSAAMSG CEVKLENLRI CSGEALVVNF 360 AFQLHHIPDE SVSTTNHRDT LLRLVKSLSP KVVTLVEQES NTNTTAFYPR FAETLDYYTA 420 IFESIDVTRP RENKERISVE QHCLARDIVN IIACEGAERV ERHELHGKWK ARLKMAGFAP 480 FPLSPLVNST IKSLLEKYND KYTLEERDGA LFLGWMNRDL VVSSAWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |