PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA58191.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | C2H2 | ||||||||
Protein Properties | Length: 465aa MW: 48651.6 Da PI: 9.4497 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.3 | 1.3e-05 | 63 | 85 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H PKA58191.1 63 FVCEICNKGFQRDQNLQLHRRGH 85 89*******************88 PP | |||||||
2 | zf-C2H2 | 14 | 0.00015 | 139 | 161 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ PKA58191.1 139 WKCDKCSKNYAVQSDWKAHVKTC 161 58*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 465 aa Download sequence |
MLMAMELENS SGIRVSTSAS SEVSASGKPM PPPKKKRNLP GTPDPNAEVI ALSPGALLAT 60 NRFVCEICNK GFQRDQNLQL HRRGHNLPWK LRQRAGAEVR KRVYVCPEAS CVHHNPSRAL 120 GDLTGIKKHF GRKHGEKKWK CDKCSKNYAV QSDWKAHVKT CGAREYRCDC GTIFSRKDSF 180 ITHRTFCDVL AVERTMSAQG NASVPEPANP RVDEEQKASP PVNLPIQQAE NAAGGLHHHP 240 PPPPPPSTSV NSSGSSSFTT TSGGSSNISP TTTTTSTSFF ASLFASSSAA ASTSATPTAS 300 FSAFIVGTSN HRNPESTANA ATPETRCHFT APQPSPHISA TALLQKAAEL GARSSSASFF 360 RGFGLSTSSS AIEAAAGGGG LQCLQPQDQP CEPSEPLFSA GLFLGPSSMF GPKPATLDLL 420 GLRMGQASST TANGLSACIN GPPMGVKSGA FAPPAKAGSG GRPEG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 1e-106 | C2H2 family protein |