PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA58167.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 425aa MW: 45611.2 Da PI: 5.6773 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 275.8 | 1.4e-84 | 36 | 424 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.....sseelaalkl..fsevsPilkf 93 ++lL+++Aea++s+d++laq++L+ l + a dg++ qRlaa f++AL r +rs+s +++ ++ ++ ++ s +l+ ++l f +++P+++f PKA58167.1 36 EQLLVHFAEAMESNDASLAQQILWVLINVAPADGNSSQRLAAAFLRALVLRASRSGSPCAALTSAMLAHCSDggggsISLRLSPVSLagFIDLTPWYRF 134 689******************************************************99998888888888766654444444444489********** PP GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvl...vakr 185 ++ +aN aI+ a+ g vHi+D++ ++ +Q p+L++aLa Rp+gpp +R+T+ ++ + +++ e+g++L fA++ +v++ef+++ ++ PKA58167.1 135 GFSAANAAIVGATGGFPVVHIVDLSTTNSMQIPTLIDALAGRPDGPPFIRLTVPCPSGGSpppaLDTSIDELGSKLVAFARSRNVEMEFRAVpanPVDG 233 ****************************************************9766333367668999************************4443334 PP GRAS 186 ledleleeLrvkp.....gEalaVnlvlqlhrllde.svsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278 +e+l le+Lr+++ al++n++++lh++++e ++s +s+r+ +Lk+++sl P+vvvvv+++ad ++++ + r+ a++y + fd++++ lpr PKA58167.1 234 FESL-LEHLRLQQgifsgPVALVINCQMMLHYIPEEvTGSRPSARTMFLKALRSLDPTVVVVVDEDADFTAGDIVGRVRAAFNYLWIPFDAMDSILPRG 331 4444.8999999988887889*************874677888******************************************************** PP GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 s++r+++E++ + ++i n++a+eg +r+er et + W+er++e+GF+ v ++ +aa+++k+ll ++ g+ ++++ ++lvl+Wk++ v++S+W PKA58167.1 332 SDHRRTYEAA-FCWKIDNAIAQEGLKRVERLETRGMWSERMTEVGFRGVGFGVEAAAEVKSLLDGHS-AGWGMKKDGEELVLTWKGNDAVFASVW 424 **********.*******************************************************9.999************************ PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence |
MQFKTTAKSL PCFRPSPDFL AAGKPLGSLN NSACTEQLLV HFAEAMESND ASLAQQILWV 60 LINVAPADGN SSQRLAAAFL RALVLRASRS GSPCAALTSA MLAHCSDGGG GSISLRLSPV 120 SLAGFIDLTP WYRFGFSAAN AAIVGATGGF PVVHIVDLST TNSMQIPTLI DALAGRPDGP 180 PFIRLTVPCP SGGSPPPALD TSIDELGSKL VAFARSRNVE MEFRAVPANP VDGFESLLEH 240 LRLQQGIFSG PVALVINCQM MLHYIPEEVT GSRPSARTMF LKALRSLDPT VVVVVDEDAD 300 FTAGDIVGRV RAAFNYLWIP FDAMDSILPR GSDHRRTYEA AFCWKIDNAI AQEGLKRVER 360 LETRGMWSER MTEVGFRGVG FGVEAAAEVK SLLDGHSAGW GMKKDGEELV LTWKGNDAVF 420 ASVWV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49950.1 | 1e-123 | GRAS family protein |