PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58167.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 425aa    MW: 45611.2 Da    PI: 5.6773
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58167.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS275.81.4e-84364242373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.....sseelaalkl..fsevsPilkf 93 
                 ++lL+++Aea++s+d++laq++L+ l + a  dg++ qRlaa f++AL  r +rs+s +++  ++  ++ ++      s +l+ ++l  f +++P+++f
  PKA58167.1  36 EQLLVHFAEAMESNDASLAQQILWVLINVAPADGNSSQRLAAAFLRALVLRASRSGSPCAALTSAMLAHCSDggggsISLRLSPVSLagFIDLTPWYRF 134
                 689******************************************************99998888888888766654444444444489********** PP

        GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvl...vakr 185
                 ++ +aN aI+ a+ g   vHi+D++ ++ +Q p+L++aLa Rp+gpp +R+T+  ++  +      +++ e+g++L  fA++ +v++ef+++    ++ 
  PKA58167.1 135 GFSAANAAIVGATGGFPVVHIVDLSTTNSMQIPTLIDALAGRPDGPPFIRLTVPCPSGGSpppaLDTSIDELGSKLVAFARSRNVEMEFRAVpanPVDG 233
                 ****************************************************9766333367668999************************4443334 PP

        GRAS 186 ledleleeLrvkp.....gEalaVnlvlqlhrllde.svsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                 +e+l le+Lr+++       al++n++++lh++++e ++s +s+r+ +Lk+++sl P+vvvvv+++ad ++++ + r+  a++y +  fd++++ lpr 
  PKA58167.1 234 FESL-LEHLRLQQgifsgPVALVINCQMMLHYIPEEvTGSRPSARTMFLKALRSLDPTVVVVVDEDADFTAGDIVGRVRAAFNYLWIPFDAMDSILPRG 331
                 4444.8999999988887889*************874677888******************************************************** PP

        GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 s++r+++E++ + ++i n++a+eg +r+er et + W+er++e+GF+ v ++ +aa+++k+ll  ++  g+ ++++ ++lvl+Wk++  v++S+W
  PKA58167.1 332 SDHRRTYEAA-FCWKIDNAIAQEGLKRVERLETRGMWSERMTEVGFRGVGFGVEAAAEVKSLLDGHS-AGWGMKKDGEELVLTWKGNDAVFASVW 424
                 **********.*******************************************************9.999************************ PP

Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MQFKTTAKSL PCFRPSPDFL AAGKPLGSLN NSACTEQLLV HFAEAMESND ASLAQQILWV  60
LINVAPADGN SSQRLAAAFL RALVLRASRS GSPCAALTSA MLAHCSDGGG GSISLRLSPV  120
SLAGFIDLTP WYRFGFSAAN AAIVGATGGF PVVHIVDLST TNSMQIPTLI DALAGRPDGP  180
PFIRLTVPCP SGGSPPPALD TSIDELGSKL VAFARSRNVE MEFRAVPANP VDGFESLLEH  240
LRLQQGIFSG PVALVINCQM MLHYIPEEVT GSRPSARTMF LKALRSLDPT VVVVVDEDAD  300
FTAGDIVGRV RAAFNYLWIP FDAMDSILPR GSDHRRTYEA AFCWKIDNAI AQEGLKRVER  360
LETRGMWSER MTEVGFRGVG FGVEAAAEVK SLLDGHSAGW GMKKDGEELV LTWKGNDAVF  420
ASVWV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-123GRAS family protein