PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA58112.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | SBP | ||||||||
Protein Properties | Length: 171aa MW: 19139 Da PI: 8.6674 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 78.8 | 7.9e-25 | 60 | 108 | 1 | 49 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSE CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrf 49 +Cq+e+C+adl+eak+yhrrhkvCe+h+ka +v+v+g++qrfCqqCsrf PKA58112.1 60 ICQAEKCAADLTEAKRYHRRHKVCEAHAKAVAVIVAGIRQRFCQQCSRF 108 5***********************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MRRTAKEPRP SPKGKAFAAT EEGGCGEEES EEERRLRQSA SPPAAPGARG RAAAIAGVPI 60 CQAEKCAADL TEAKRYHRRH KVCEAHAKAV AVIVAGIRQR FCQQCSRFLC PPLFRLFTVF 120 TTERRQNLST GRTLRVSSDE GTESLLDVER NPILFMIEQF LFCYSFLEFL C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02065.2 | 2e-23 | SBP family protein |