PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA57740.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 310aa    MW: 34862.3 Da    PI: 6.354
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA57740.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.21.9e-10115159655
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                    Er+RR r+++++ eLr+l+P+ +      K++Ka+i   A+ Y++ Lq
  PKA57740.1 115 IVSERKRRGRMKEKLYELRSLVPNiS------KMDKASIIADAIVYVQGLQ 159
                 568*********************66......*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MEYAYPHLHM ASISSFLGEA DNFCYLINDV SHDQGSMFFD EGISEKKGFF TDFDLSNGLP  60
SFGLLFDSAA ENHGGMEEEG TGENINGGCD EHCSLAGAAD PSKAMKQRRD RSKTIVSERK  120
RRGRMKEKLY ELRSLVPNIS KMDKASIIAD AIVYVQGLQR QAKRFTEEIA ILRSSSHDED  180
HREVDGRDHN SSLISPIKKR RIPRKEWNNT TLCRGKMLGV MAHEVGDKRF YIKIEFKNGG  240
GVASSLYHAI ESLSSLETES INFSCTSDRY ICSLTVNGRG FGEEMNLSTM KFWIMGALLK  300
EGFQFDENAM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.12e-43bHLH family protein