PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA57437.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

C2H2

Protein Properties

Length: 284aa MW: 31174.5 Da PI: 7.955

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA57437.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.9	4.2e-06	256	278	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C+k F+++ +L+ H + H PKA57437.1 256 VCPKCSKAFRDPVLLVEHVEKdH 278 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MGTPAFPNLG EHCSVEDCKL IDFLPFTCDR CNQVFCLQHR SYLSHLCPNA NQTDVTVLIC 60 PLCAQGVRLV PNEDPNITWD NHVNGDCDPS NYQKVTKKKR CPVLGCKETL VFSNTVRCKD 120 CFQDHCLRHR FGPDHKCLGP KKLNTGFSLI GGLRNQKGEL SSSQTSSGSS KWSLSLLNAA 180 SSLRASAEAG MQRLAIATNQ ALQKAKDGMP QGSADLEEQC MQCKARFSSV NALIDHVEGV 240 HERHVSHVQG KVIVDVCPKC SKAFRDPVLL VEHVEKDHGG SSKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-107	C2H2 family protein