PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA57393.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 491aa MW: 52717.6 Da PI: 7.7044

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA57393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.6	2.5e-33	203	259	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkvers d++v+ei+Y+g+Hnh+ PKA57393.1 203 DDGYNWRKYGQKQVKGSEYPRSYYKCTHLKCPVKKKVERSL-DGQVTEIIYKGQHNHQ 259 8**************************************.*************8 PP
2	WRKY	106.9	1e-33	374	432	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gC+v+k+ver+++dpk+v++tYeg+Hnh+ PKA57393.1 374 LDDGYRWRKYGQKVVKGNPHPRSYYKCTTLGCNVRKHVERASTDPKAVITTYEGKHNHD 432 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MPNPTADGGA RGPAAPDAEA KRPFISLPPR SAVEGLFRGG AVEASPGPMT LSSFFAEDPE 60 SECRSFSQLL AGAMASPTAA ARAAPADARA GGLNLGHSRP MNLQVGPSPF FTVPAGLSPG 120 GLLDSPAMFS SNLGHFGMSH QQALAQVSAQ AAYSHSSSSL NQPILTVNMA TDQPKNSITL 180 NTNTSITDQR SQPAALVVEK PADDGYNWRK YGQKQVKGSE YPRSYYKCTH LKCPVKKKVE 240 RSLDGQVTEI IYKGQHNHQQ PPANKRAKEG GNMISGSADS IADPDFLINS EASDGLTGVC 300 KRDREFGHEA SEQLSGSSDR GELADAEAGI EEAEGGEPDQ KRRVMEAKVV EPASHRTVTE 360 PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPHPRSYYKC TTLGCNVRKH VERASTDPKA 420 VITTYEGKHN HDIPAARNSS HNTSTTAAHS NNAKSHNSIS SDPNILRISD PNNNLQRPVT 480 VLQLKGEHEI A

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MPNPTADGGA RGPAAPDAEA KRPFISLPPR SAVEGLFRGG AVEASPGPMT LSSFFAEDPE  60
SECRSFSQLL AGAMASPTAA ARAAPADARA GGLNLGHSRP MNLQVGPSPF FTVPAGLSPG  120
GLLDSPAMFS SNLGHFGMSH QQALAQVSAQ AAYSHSSSSL NQPILTVNMA TDQPKNSITL  180
NTNTSITDQR SQPAALVVEK PADDGYNWRK YGQKQVKGSE YPRSYYKCTH LKCPVKKKVE  240
RSLDGQVTEI IYKGQHNHQQ PPANKRAKEG GNMISGSADS IADPDFLINS EASDGLTGVC  300
KRDREFGHEA SEQLSGSSDR GELADAEAGI EEAEGGEPDQ KRRVMEAKVV EPASHRTVTE  360
PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPHPRSYYKC TTLGCNVRKH VERASTDPKA  420
VITTYEGKHN HDIPAARNSS HNTSTTAAHS NNAKSHNSIS SDPNILRISD PNNNLQRPVT  480
VLQLKGEHEI A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	1e-115	WRKY family protein