PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA57359.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB | ||||||||
Protein Properties | Length: 592aa MW: 65172.6 Da PI: 6.2392 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56 | 8.8e-18 | 42 | 89 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEde+l d v+++G g+W+++ ++ g+ R++k+c++rw ++l PKA57359.1 42 KGPWTSEEDEILMDHVRKYGQGNWNSVQKYSGLARCGKSCRLRWANHL 89 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 47.1 | 5.5e-15 | 95 | 138 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++T+eE+ ++ +++ +G++ W++ a++++ gRt++++k++w++ PKA57359.1 95 KLPFTPEEERKIMELHSVMGNK-WARMASHLP-GRTDNEIKNYWNT 138 689*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 592 aa Download sequence |
MNPDKSKGNK VVSPKSQPCS PSNDEGSSGI SSKVEGRTDS KKGPWTSEED EILMDHVRKY 60 GQGNWNSVQK YSGLARCGKS CRLRWANHLR PNLKKLPFTP EEERKIMELH SVMGNKWARM 120 ASHLPGRTDN EIKNYWNTRI KRQQRAGLPL YPPDLCLQVV DVNQLMNDQF CCAEKRNDKT 180 LSGGKYEKLT NGFKSFMASR QQLSYASSVD IPCSMQKSWG FEPQACSTSG QGGNSTKRSK 240 ICEAVFPGCH GNVTYVVPTY DQFQIQHPRM VFWNSKVGYP FEPSADSKNL LSSRCLKSGS 300 NALSNSYFSA SSHLPGTEKM ELPSLQYPGI DFHNLLAGHN GLYYTLDGNI QSSGPPSDFT 360 GKSDCTLPHS SGLLEDLVYQ SQGIDNTYKE SSEKSSVSSA ITPGDMLESS KLNILNVDLE 420 GRSVPSSPFG LSADSLLDDS SSVFRRHEYY EYHELPPFKA SLRGEVATPS TEQVSTSKLQ 480 DKVASIIFES VRPDVFLGEG CVDRSQDAKE NSHMGDAIVA LLAQDPAPSS AFSADSCTWN 540 NMPQDVQETS DVDDVVAALP VQDPAPSSTF SLDSCPWSNM PSVNHISDGK HD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06100.3 | 5e-72 | MYB family protein |