PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA57309.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | WRKY | ||||||||
Protein Properties | Length: 227aa MW: 24668.7 Da PI: 5.7345 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.1 | 1.2e-30 | 132 | 190 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K++k+s++pr+YYrC+++gC+vkk+ver+ +d+++v++tYeg Hnh+ PKA57309.1 132 LDDGFKWRKYGKKPIKNSPNPRNYYRCSTEGCSVKKRVERDINDQSYVITTYEGVHNHT 190 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MRQVRRPSQL MALLDVLRPF PAAMPTFFSP EEIAAGVHVS NAPLEEYPFS SLELSDYVLP 60 EDSVDQTPAV IENSASPAAP AAAFLPQSFV EAFSAPPALA AGSSSSMSLP PLPRLAEGSR 120 IAFRTKSEVD NLDDGFKWRK YGKKPIKNSP NPRNYYRCST EGCSVKKRVE RDINDQSYVI 180 TTYEGVHNHT SPGIVYYTTQ DAVSGWFLLS GCQMPGPSGT ASSSSNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 2e-40 | WRKY family protein |