PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA57283.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GATA | ||||||||
Protein Properties | Length: 202aa MW: 23253.7 Da PI: 10.5704 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.5 | 1.8e-18 | 62 | 95 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs+C tt+TplWR+gp+g+k+LCnaCG+++ k + PKA57283.1 62 CSHCSTTTTPLWRSGPRGPKSLCNACGIRQMKAR 95 ****************************997765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MSSKMRLMRR MMTGTSDHHL IAHELTEERS RRRRSGRLTI TNESKIETRD DQSHVMSMIR 60 TCSHCSTTTT PLWRSGPRGP KSLCNACGIR QMKARRALAD HEQGSGAAEK MKKASRKEKI 120 MIIRSSELDR VVPYKKRFRY FMNHAGDHDH DHDQDQDQEN EKMMKKMKIR KSSPAAFHSA 180 FPQDEKEAAV LLMALSCGMI HG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26150.1 | 3e-18 | GATA family protein |