PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA57215.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C3H
Protein Properties Length: 343aa    MW: 37358.7 Da    PI: 7.8289
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA57215.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.42.2e-07113132626
                 -SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                 C++f++ G Ck Gd+C +aHg
  PKA57215.1 113 CPDFRK-GNCKKGDSCEYAHG 132
                 ******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MGENARRRVL IPPWPILEES IGVTPTYSFA LSSTEPSRLP GIFPASESDS DELDLADPPD  60
AAYSSDEFRM YEFKVRRCSR GRSHDWTECP FAHPGEKARR RDPRRFNYSG SSCPDFRKGN  120
CKKGDSCEYA HGVFESWLHP ARYRTQPCKD GTACRRPVCF FAHTAEQLRV FSGNEQHQQQ  180
RSPRSAAGSP KVADSYDGSP LRRRASLEAY LSTKGLTSSS PTSTLAPAWD SPPVSPAARM  240
MASMKVLHLR PTASPPPATS WGGGFGGCEF GCSRAALPAG ITCLSATPLA TAGVDGAERS  300
RVTGGCKIYD SDFYSSLRES PEEMDAGVGF PAPDVGWVSE LVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25900.26e-64C3H family protein