PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA57186.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 321aa    MW: 36045.2 Da    PI: 7.8062
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA57186.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.55.5e-53161441128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPtdeel+ +yLk+k++ +k++l evi+evd++++ePwdL++  ++ a  ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + +  
  PKA57186.1  16 VPPGFRFHPTDEELLLYYLKRKISFEKFDL-EVIREVDLNRTEPWDLQErcRIGAtPQNEWYFFSHKDRKYPTGSRTNRATTAGFWKATGRDKCIRT-A 112
                 69****************************.99**************963433332556*************************************9.8 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  +++g++ktLvfy+grap+g+ktdW+mheyrl
  PKA57186.1 113 YKKIGMRKTLVFYRGRAPQGQKTDWIMHEYRL 144
                 899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MASSSTAGAT PNSGGVPPGF RFHPTDEELL LYYLKRKISF EKFDLEVIRE VDLNRTEPWD  60
LQERCRIGAT PQNEWYFFSH KDRKYPTGSR TNRATTAGFW KATGRDKCIR TAYKKIGMRK  120
TLVFYRGRAP QGQKTDWIMH EYRLDNSDNP QLAASIDEDG WVVCRVFKKK CFYKVAGEGS  180
SSHGSDAMIT ASGAGVNIDD RSLTLSSHYL HQQQALHLHH HHHHSLYKPD LALHYPQLTP  240
EQPPENPYSH VQVHDLLSSH RPVTGYIEAN EWAVIDSMDQ AGRFSGAGTT AVEQMNHVSQ  300
QHGGSSGGGG GGEMDLWGYG K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G10350.11e-105NAC family protein