PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA57005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | C3H | ||||||||
Protein Properties | Length: 167aa MW: 18835.5 Da PI: 8.4996 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 19.4 | 1.9e-06 | 108 | 129 | 5 | 27 |
--SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHgp 27 +C+ ++ G+C+ G++C+F H++ PKA57005.1 108 ECHMYMM-GFCPNGPSCRFRHSK 129 7999999.***********9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MDESDGALSF DFEPALVAGA GGTSAALPQE GQAPTAPAAV AAAPMERRNF RRTVCRHWLR 60 GLCMKGDSCG FLHQYDKHKM PVCRFFRNFG ECREKDCLYK HTLEEIKECH MYMMGFCPNG 120 PSCRFRHSKL PGPPPPAEEV LKRIQHLSSS SYNSFNRQFQ HRNASPI |