PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA56884.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | bHLH | ||||||||
Protein Properties | Length: 255aa MW: 28105.9 Da PI: 8.2103 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36 | 1.3e-11 | 122 | 169 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ +L+el+P + +k Ka iL + ++Y++sLq PKA56884.1 122 SHSLAERVRREKISERMKKLQELVPGC----DKIIGKALILDEIINYVQSLQ 169 8*************************9....899*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MGTAVFLPDS PMEILLNLHD GQAGSLCSNG DSYSAEAIPG GSSSLTANSF GSRTEQNPLI 60 SSSEKRRSKD MKRGSKNVAS QSKGKSKRDK KSRSTGPKEM EEKKPSTAYI HVRARRGQAT 120 DSHSLAERVR REKISERMKK LQELVPGCDK IIGKALILDE IINYVQSLQN QVEFLSLKLA 180 EVNSILYEYG LGFDDFRRPQ EIDQIGNLQT VLVPSMMESI EMQGPADGFM MQAMASSSFL 240 LLHGEGSTIE FPQVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 2e-46 | bHLH family protein |