PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA56864.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 191aa MW: 20565.5 Da PI: 4.867 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.6 | 7.6e-19 | 40 | 91 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++y GVr+++ +gr++AeIrdp + + r++lg+f+taeeAa a+++a+++l+g+ PKA56864.1 40 TRYLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAEEAAVAYDRAARSLRGA 91 5799******.**********843...4*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MDFSGLFSFS SSSSSSFSPS NQSPAEKKST SPARGGSGGT RYLGVRRRPW GRYAAEIRDP 60 ATKERHWLGT FDTAEEAAVA YDRAARSLRG ARARTNFAYP DLLQGSSLTP FLSPDISYVD 120 GGEEEKGGDQ SVWCDQGDFG CYELPAVAAA GGVYFEEGYV HSPLFGQMPA ASEALLPEGF 180 RLEGSSSSHF F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13910.1 | 2e-27 | ERF family protein |