PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA56849.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 309aa MW: 32699 Da PI: 4.7745

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA56849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.2	1.1e-30	59	117	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++++tY+++Hnh+ PKA56849.1 59 TDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPTMLIVTYSSDHNHQ 117 69***********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MEDAGLSPEL SPSSAADCSP PSPSVKKSRR SVKKRVVSVP VPEGEAARAK GGSEAPPPTD 60 SWAWRKYGQK PIKGSPYPRG YYRCSSSKGC PARKQVERSR ADPTMLIVTY SSDHNHQWLL 120 PKNQHHQGGG GRGGGGGKQN SSACTEVSAT AAAESESKCK GSEEVVPADS SLGEAAAEPE 180 VDRFSDLIVE EEPSLLMQDD FRWFSNVRSP SSAPAAADDR LLYCPIFEGA AAAVLPDDDC 240 DKFSSSGSGT AVDDEEESLF AGLGELPECS TVFRRGFLDR GMRGSDDGKR CGLEAEEAAV 300 AASWFGSTG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	128	137	GGGGRGGGGG
2	129	138	GGGGRGGGGG
3	130	139	GGGGRGGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29280.1	8e-39	WRKY family protein