PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA56834.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 444aa MW: 49057.8 Da PI: 8.7803 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 266 | 1.3e-81 | 66 | 441 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 lv+lLl A av+ +d+++a + L +l +a +gdp++R+aayf+ +L arl+ +++ +p ++ +ee++a+++++ +sP+++f+h+taN PKA56834.1 66 LVRLLLVSAVAVDRRDHRAAAQSLLELYRTACLSGDPIHRVAAYFADGLFARLSP-----AHSPAPGPS----PEEEFSAFTALYSASPFYQFAHFTAN 155 5789999***********************************************9.....444444444....578999******************** PP GRAS 100 qaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrledl 189 qaI+ea+e e +H++Dfd+++G+QWp+L+q+L++++ ++p +lRiTg+g+ s el+et+ rL++fA+ + +++fef+ r +++ PKA56834.1 156 QAIVEAFEAEesfnaGVLHVVDFDVTYGFQWPSLIQSLSDKAssnNKPITLRITGFGR----SPAELQETATRLRSFAAGFrNLSFEFKG--KLRGAKF 248 ********9966665667*********************9997745566*********....9**************998748******9..67999** PP GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse.....sFlerflealeyysalfdsleaklpreseeri 283 ++ ++ +++Vnlv+ l++l ++++++ ++L + ++l+P +v ++e+ea n + +l rf+++l+y++a+fdsl+ lp+es+er PKA56834.1 249 DPTQITAGGTATVVVNLVFFLQKLR-SHAEVR----STLAAARELNPSLVMLIEREAGGNPAgfagsGYLGRFMDCLHYFAAMFDSLNDCLPAESSERL 342 *****9999**************97.445555....5*******************999877444447789**************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllr...kvk.sd..g.....yrveee.sgslv.lgWkdrpLvs 369 +E+ lg+ei+ v+++ e ++r++ + ++e+ GF+ v+ls++ ++qaklll+ +++ +d g +rv e+ +g ++ lgW++r+L++ PKA56834.1 343 RIEKNHLGWEIMRSVTMADGEEIMRTK-----KGAMERNGFEGVRLSSRSVSQAKLLLKiksHCSaMDehGgggggFRVCERdDGRAMsLGWQERRLIT 436 ******************999777777.....789**********************97333222222121233458887553555656********** PP GRAS 370 vSaWr 374 ++aWr PKA56834.1 437 ATAWR 441 ****8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 444 aa Download sequence |
MQLEEGEDLL SLSLSVSSSR KRKRSIDQKP FDGSHILLLL QARDRMIKLD GRRQRYQEGD 60 GRGLHLVRLL LVSAVAVDRR DHRAAAQSLL ELYRTACLSG DPIHRVAAYF ADGLFARLSP 120 AHSPAPGPSP EEEFSAFTAL YSASPFYQFA HFTANQAIVE AFEAEESFNA GVLHVVDFDV 180 TYGFQWPSLI QSLSDKASSN NKPITLRITG FGRSPAELQE TATRLRSFAA GFRNLSFEFK 240 GKLRGAKFDP TQITAGGTAT VVVNLVFFLQ KLRSHAEVRS TLAAARELNP SLVMLIEREA 300 GGNPAGFAGS GYLGRFMDCL HYFAAMFDSL NDCLPAESSE RLRIEKNHLG WEIMRSVTMA 360 DGEEIMRTKK GAMERNGFEG VRLSSRSVSQ AKLLLKIKSH CSAMDEHGGG GGGFRVCERD 420 DGRAMSLGWQ ERRLITATAW RCAP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41920.1 | 7e-46 | GRAS family protein |