PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA56699.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TALE

Protein Properties

Length: 279aa MW: 30965.8 Da PI: 4.7315

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA56699.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.4	1.4e-09	223	257	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp++++++ LA+++gL+ +q+ +WF N+R ++ PKA56699.1 223 KWPYPTEADKTSLAESTGLDPKQINNWFINQRKRH 257 569*****************************885 PP
2	ELK	35.7	1.8e-12	177	198	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK+ LlrKYsgyL+sLk+EFs PKA56699.1 177 DLKDKLLRKYSGYLSSLKKEFS 198 69*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MEELYGLHPN AGFAAEDLPG LIASAGYGAL AGDGVEGLVG DMKARIASHP RYPRLLEAYI 60 DCQKVGAPPE IATVLEDIRR EKGAAADEGL GSGADPELDE FMETYCGVLR KYRSDLARPF 120 DEATTFLNAV EVQLSELCRP PSRAPIPANC EPDDVVGSSE EELSGGEGEE YKGEDRDLKD 180 KLLRKYSGYL SSLKKEFSKK KKKGKLPKEA RQILLDWWTT HYKWPYPTEA DKTSLAESTG 240 LDPKQINNWF INQRKRHWKP SENMPFAIMD SDPPLTAGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	8e-88	TALE family protein