PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56657.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 183aa    MW: 20154.1 Da    PI: 7.6762
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56657.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.27.2e-0987127954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PKA56657.1  87 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 127
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MDSPTTTPLP WDLLLHHPPQ FPYELPFPLP AAEPPADPSD DGQPLGAMKE MIYKIAAMQP  60
VDIDPASIKK PKRRNVRISD DPQSVAARHR RERISERIRI LQRLVPGGTK MDTASMLDEA  120
IRYVKFLKRQ VLHLQASNPP PPPEAVAAVD WPEGSRSSFE LGFGFAGDCA AAAGSSMTLR  180
QSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09750.13e-39bHLH family protein